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GrainGenes Sequence Report: NSFT03P2_Contig13428

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Sequence
BE423455
Contig
Ta.1425.1.S1_a_at
NSFT03P2_Contig13428
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC298126
wEST map position
BE423455
NCBI UniGene
Ta.1425
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, moderately similar to NP_001049658.1 Os03g0266700 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
4AS
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0064_C12_E24ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0064_C12_E24, mRNA sequence.
Other Name
WHE0064_C12_E24ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0064_C12_E24
Probe
WHE0064_C12_E24
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.1425.1.S1_a_at862WHE2AFFY
Ta.1425.1.S1_a_at355WHE2AFFY
TaAffx.54266.1.S1_at182WHE2AFFY
TaAffx.54266.1.S1_s_at182WHE2AFFY
TaAffx.54266.1.S1_s_at96WHE2AFFY
DNA
gctttccacatacagggggaagaatacagcatcccatggccaaataaata
gctcttctatacattcgtgtcgaatcgaataaaagaagaagagaaacaga
agagagatcctaacaggcaaaatgctactactatgtcttttacataagca
caagaatctgcacagaaaggtaagtataaaaaagttctacaaaatgctga
gcagtcctgaacaagtacctcatatcatgtacaggggagaaagcaggacg
atggacagcagccatttagtacaagagaagaaagagggatcacgcagtca
gacgtccaggctctatcaccttgcttgccggggccttgtccctctcctct
acgtacgcagatgggaaccagcctgcctttcctttgcactccccttccga
ccacccgtttggagacacctggcggaccacaacgaaatcgcccacggaga
tactgagctcaccatcagcctgaccatcaaacggatggattacctcccca
acataatgcacttcctgaccattccttgtaggttcgctagtttcagttaa
tgctggatcttctgatatgc

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