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GrainGenes Sequence Report: BE423182

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Sequence
BE423182
Contig
NSFT03P2_Contig4474
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC317309
wEST map position
BE423182
NCBI UniGene
Ta.66024
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, moderately similar to NP_001053440.1 Os04g0540300 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
2AL
2DL
6BL
7DS
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0061_B01_D01ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0061_B01_D01, mRNA sequence.
Other Name
WHE0061_B01_D01ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0061_B01_D01
Probe
WHE0061_B01_D01
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
TaAffx.64605.1.S1_at70WHE2AFFY
TaAffx.57410.1.S1_at58WHE2AFFY
DNA
tttttttttactcaaacccctgtattcagggctagtcaggtaccctttac
acgagaaacaacatagacaacgagagcacacaagagctggcgactagcca
gcgctgcaccgccgagacacgcacgtcccaggccgcattgggcagcgaag
ggtactgatccggcggcggcatgacgcactcgtgtccattgaagtagacc
ctcctcggaaacgcccagccccctgagaaggtgaagtcgctcgggtcttt
ctccagtatcatctcggtctgcacgttcccatcacccagcagcatctcgt
tgtagttcttgattccccagaacatccccgtgtcattgatggtgccgtac
tggatgaggggctggtagttgaagctgaagagctgtgtcaggctccggag
gttggggtgctgcaccaccaggttccagtcggtgtagttgctgaccacgt
cgtagttcgtcaccgtcgtcttcaccctccagtacccccggtagctctgc
ttcacgtgccagtgcacccggatcgggcacatgtgctccgtgcaccggat
gaccggcacgggcggagcgccctcggcgtcatgcagcgccgccaggacct
tggactgctcg

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