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GrainGenes Sequence Report: BE422983

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Sequence
BE422983
Contig
Ta.28018.1.S1_at
NSFT03P2_Contig10376
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC318420
wEST map position
BE422983
NCBI UniGene
Ta.48473
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Clone wlk4.pk0006.e8:fis, full insert mRNA sequence'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
3AS
3DS
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0059_F02_K03ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0059_F02_K03, mRNA sequence.
Other Name
WHE0059_F02_K03ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0059_F02_K03
Probe
WHE0059_F02_K03
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.28018.1.S1_at672WHE2AFFY
Ta.28018.1.S1_at632WHE2AFFY
DNA
tgaacctggctgaatacagattgaccaatggtggtaattcccttgtcgct
gcagttgccaccatttggtagtcggtgcgtggggtaaggtcatggttgtg
gtgggtccaataagctgaagattttcaaggaagcaactggtcctgggtat
caatatcgcagcgtttgtaatatgagtataatcgtcaaacttgaggagtc
tgggtcttttttatcaggctactatgtaggggttgcatctttagtatggt
gtgcactattttgctactgtatagcctgagtttaagcttctgcaactctg
cgaggcatttaggggacaattcttgaatggtttggtttgtggggttcttc
aggaatgaagtgagttgcagtttgtccgaacatgtcaatgtcagctttca
cttgattattagtatacctgtgtcgttg

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