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GrainGenes Sequence Report: BE422511

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Sequence
BE422511
Contig
NSFT03P2_Contig18020
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC320802
wEST map position
BE422511
NCBI UniGene
Ta.38055
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, strongly similar to NP_001043588.1 Os01g0618100 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
3BL
3DL
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0056_C08_E16ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0056_C08_E16, mRNA sequence.
Other Name
WHE0056_C08_E16ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0056_C08_E16
Probe
WHE0056_C08_E16
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.22895.1.S1_at450WHE2AFFY
Ta.22895.1.S1_at98WHE2AFFY
DNA
taaatttacacggcaggtggagacagtgcacatgttcttattcacgggac
aattcacaagatgaagatacagggggcaccattcatcacacgagcacata
gcatggcatgcttgtttcaccgtctccacaatcttttgtagtttcacttc
tttggcgtatggcggtgattccaggtgaatttcgcaaacgaagtatactg
cctcccaccggcaacatcttcttcgcgtttctcgttgctaatctctttga
ggtcatcttccgtgagcctcacc

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