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GrainGenes Sequence Report: NSFT03P2_Contig2761

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Sequence
BE422471
Contig
NSFT03P2_Contig2761
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC348467
wEST map position
BE422471
NCBI UniGene
Ta.38771
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, weakly similar to NP_001132165.1 hypothetical protein LOC100193587 [Zea mays]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
5AS
5DS
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0056_G07_M14ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0056_G07_M14, mRNA sequence.
Other Name
WHE0056_G07_M14ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0056_G07_M14
Probe
WHE0056_G07_M14
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
TaAffx.85886.1.S1_at62WHE2AFFY
DNA
aaccaagctattctaaaaacagtagtgcaatcaaatccaagccaatgcct
taggagagaacaagttatgcaccagactaactacatcaaaacgcattaca
gtatggaagcagtatcagtatatccccttctgtttccccaggttctctga
aaaaatcatctaggagtcgttcttgcgtaggttgtagaagattgagccat
caatcgtctccatagccagttgattcaaccgcagaaggatcaacaagtag
gatcttcctttgcgccccaagccgattgatgcaacatcatcctgatttaa
acttccctgagccttatcaccaccaaagtatgcattcagttttgaaacgg
cgtcatgcaattcctcccatgatgcaagagtcttcatgtaaggaggaagt
ttatcgtactcctccttcgacgcccttatcattccttggaaagcattgtc
atcttgctcat

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