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GrainGenes Sequence Report: Z17327_1.cds

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Sequence	Z17327_1.cds
Structure From Source	Z17327
Source Exons	1 1149 1148 3901
Gene Product	BARE-1 polyprotein
Remark	CDS note: Frameshift at 4541. Stop codons at 3992,5652,5988, 6519. Includes putative gag,aspartic proteinase, endonuclease,reverse transcriptase,RNase H domains conceptual translation: MAHARVTLNFNTFLEKAKLKDDGSNFV DWAHNLIKLLLQAGKKDYVLNRALGDEPPATADQDVKNAWLTRKEDYSVVQRAVLYGL EPGLQRRFERHGAYEMFQELKFIFQKNTRIERYETFDKFYACKMEENSSVSEHVLKMA GYSSRLAELGIELPQEAITDRILQSLPPSYKGFLLNYNMQGMNKSPGELFAMLKVVEE LRKEHQVLMVNKTTSFKRNDKGKKGSSKKSGKPVANPTKKPKAGPKPETECYYCKGMG HWKRNCPKYLADKKAAKEKSGIFDIHVIDVYLTSSRSSAWVFDTGSVAHICNSKQELR NKRRLAKDEVTMRVGNGSKVDAIAVGTISLQLPSGLVMNLNNCYLVSALSMNIIWILF IARRLLVFKSENNGCSVSMSNIFYGHAPIVRGFFILNLDSDNTHIHNIETKRVRVNND SAMFLWHCRLGHIGVKRMKKLHTDGLLESLDTCEPCLMGKMTKTPFSGTMERASDLLE IIHTDVCDPMSVEARSGYHYFLTFTDDLSRYGYVYLMKHKSETFEKFKQFQSEVENHY NKKIKFLRSDRGGEYLSFEFGAHLRQCGIVSQLTPPGTPQCNGVSERRNRTLLEMVRS MMYITDLPLSFWGYLLKTAAFTLNRAPSKSVEMTPYELWYGNRPKLSFLKVWGYDAYV KKLQPEYLEPKAEKCVFIGYPKETVGYTFHLKSEGKVFVAKNEAFLEKEFLSRELSGR KIELDAVVEPLIPLDGGARQGETPVVVMPGEEVNDDDHETPDQVPVESRRSTRPRTTR EWYGNPVLSIMLLDNNEPTNYEEAMMGPDSNKWLEAMKSEIGSMYENKVWTLEVLPEG CKAIQNKWIFKKKTGADSNVTVYKALVAKGFSQVQGIDYDETFSPVAMLKSVRIMLAI AAFFDYEIWQMDVKAAFLNGLLKEELYMMQPEGFVDPKNANKACKLQGSIYGLVQASR SWNKRFGEVIKAFGFIQVVGESCIYKKVSGSSVAFLILYVDDILLIGNGVEFLENIKD YLNKSFSMKDLGEAAYILGIKIYRDRSRVIGLSQSTYLDKVLKRFKMEQSKKGLLPVL QGTRLSKTQCPATDKDIEHMSTVPYASAIGSIMYAMLCIRPDVSLAISMAGRFQSNPG VDHWMAVKNILKYLKRTTEMFLVYGGDKELAVKGYVDASFDTDPDDSKSQTGYVFILN GGVVSWCSSKQSVVADSTCEAEYLAASEATKEGVWMKQLMTDLGVVSSALNPITLFCD NMGVIALAKEPQFHKNTIRIKRRFNLIRDYVEEEDVNICKVHMDLNVAPAD Feature: CDS: citation = [1];
Codon Start	1

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