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GrainGenes Sequence Report: AE000877

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Sequence
AE000877
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
Germplasm
BYU132 (oat)
Species
Avena erithiana
Title
Methanobacterium thermoautotrophicum from bases 966225 to 976858
Probe
AE000877
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA Homology
CDO1462_WHE03G08.r1
DNA
ATGGCTTACCGCCCAGACCATCATGTCTCCCCATTGTCGGTCAACGGTTA
CCATCAGCGTTGGTGTGTCGATGCGGTTTATACTCTCGCCCGCATAGACC
GTGGTTGTCTCATGGACTTGTCGGCTGGCGAAGGATTGATTTCTCGATTC
CACGGCAATCTCAGTCCCGAAGATAATTTTTTCAGTAGGGGCTTGGGCCA
ACATGTAATGGATCGATGATGAAAAACACGCAGAAGAACACATATTTACC
CAGGTTCGGACTCCCTGATGATGGGATAAAAGTCCTACTCCTGCCTTCTC
CACTATATTATGAGTATCAAGATGTGTCCTACATGAACTCCGGCAAGAAA
ACAACAACTGAAACATAAATATATGTTAATTTGAAGCTTTTCCATGGCAA
AAAAAAATGATACACGACTTGGACATATCACACACATGCAACAATGGTGC
TAGCAACTTTCTCACATGTCTAGGAAGAGGCTCACCCATCTGAGCTGGGT
TTTGGCCTGTTCAACATTCCACCATACTTGTATACATATGTTAGGGTCTC
ATGCAAGATTTAGAGGGATTTCAACCCTCTGAAGCATCGTTTCGATCAAA
ACCCTAACCCGTAGGTCCTACGGATCTACCCCTTTGACCGGCTTCCAACG
GCGGTTGGCTGGTGGACTTTTCTCTTGGTTTATGTTTGGTTAGATCATAG
CTACATATAACAAAACCTTAGAGCCCTAATTCACACAAGATTCCTTCTGA
TTGACCCAGGAAATTTATAGCTATAAGTATAGAATCTTCCATAGTGACAT
CGCATGTCTATGAAGATGCTCACACGTGGGAGCTGGGTTTTAGCATTTTA
AACATTACACCACACTTGTATACATATGCAACATTTGGAGGAATTCCTAC
CTTCCAAAGTGTTGTTTCGGGTGAAAATCTAGCCCGTGGGCAGCACAGAG
TCTACCCCTCTGAAATTCTCCGAAAGAACAGGTGACAGATGAACTTTTGT
ATTTATTTTTGTTAGGTTAAGTCATAACAACATGGAAAACCAAGGTTGAG
TCCAACTTCACATCGATTAACCCATAGTTGGGGTTTCGCCATATATCGTT
TTATGCGAGTCCAAATGTGAGCATAAGAAATAAAAAACCTTTATACTATG
ACATTATATGTGATATATTATTAGGAAATAAAAGCAAACATAACTAAAAC
AAAGGAAATAAAAGAAAATTAAAAAGGGGGTATACCAACCGCCTCCATCA
TGGCCGCGGCATACACAAAGCCTTGTTGCGTGTGTGCGTTCATAGGGATG
GGTGCATGTACGTGTTGTGAGTGTCTACGATTGTACTGTGTTTCTCAAAA
AAAAAGTTTTGTTTGAGTACTTGTAGAAAAAAGGAAATAAGTTTTGTTCG
AGAGCCCCTTGTGTGTATATTCCGCAGTTCTCTACTGATTCCATTTACTT
AGGAGTACTTTTTTTTTACTGAATCAATTTACTTAATGAAACCGCATCCT
TCACATAAAGGATGCTGTCATCATTTTGTTAAGATATGGGTGCTCATCTA
TCTATCCAAACATTAAGTCCTGTATTCTGATGTCCGTTGGCGACAGTAGC
TTAGATTGGTAGATCCGGCCTTGAAATTTAAAAGGTCATTGGGACTTAAA
ATGCTAAGTACCAGCACGCGCATCTTGTCTCTCCAGGAAGAATAAAAGCG
ATTTCCAGACTTTGTACTCGATCTGAACTCTGGATAATCGAAAGCCAAAT
TCTCTTGATCCTAAATATAATCTCCAAAAACGTTACTATAATAAGTAATA
AATTTTTTTGGTTTCTAAATAAATTCTTTTGGTTCTGATCAGCTGTGTGC
ATCTGGTTATGCAGAGACCAGAGACCAGATGTAAACGTTACTATAATAAA
TAATAAAGCGCCCATTTAAAAAAAAATCTCCAAAACTAAGAGTCAGACAG
CAATGCTGTCGTCCAGACAAACTGTTCATCGTTCAGTCATTGTCCATTGT
TACATCTAGTCTTGTCCATTCTACCGATTTTACTTGACAAAAGACTATTA
CTCCGACCCATATTAGTTGATTCAGATTTATCTAAATACGAATGTATCTA
GTCAAGTTTTAGTGCTAGATACGAGTGTATCTAGACAAATTTGAGTCAAC
TAATATGGATCGGAGGGAGTATAAGAAGTTGACTGGGAGTCTAGGACTGC
AACGTTAAATTAAGCTGGATCGTCAAATTGGGTGGACGTGATAGGTAGCG
TGCCTTCTGCGCTCCAAGTAGAGTGAAAAGTCGAGTGTTGTGCTGCAGTG
CATATATCCCTGTTCTTGCCATCGTCCATGGCCATGACAAACATGAATCC
ATTTCCCTGTTCTTTCTAGGGCTCCTCCTCACTGGCCTTACAGCACCACA
GCTTATCGCCGACGACGGCAACCAGCAGCAGTTTGTCTACTCCGGCTTCG
CTAACGCTAACTTCACCCTCGACGGCACGGCCTCGGTCACGCCAAGTGGG
CTGCTTGAGCTGACCAATGGCACAGCCATGAGCAAGGGCCACGCCTTCTA
CCCGACTCCACTCCACCTCCGCGGCTCGCCCAACGGGACGATACAATCCT
TCTCCGCCTCCTTTGTGTTCGGCATCATTTCCGTCTACAACTTGAGCAGC
CATGGCCTCACCATGTTGATCGCAGCGAGCAAGGATTTCTCCGGGGCGAA
TCCGGTACAGTACCTGGGCCTTGTCAATGGCTCGAACAATGGCAATACAA
CCAACCACATCTTCGCCGTTGAACTCGACACATGGCAAAACCCCGAGTTC
GGAGACATCAACAACAACCACGTTGGCATCGATATCAATGGCCTCAACTC
TGTGCAGTCTCACCCAGGCGGCTTTTTCCATGACCAGAACGGCACGTTCA
AGAATTTGACTCTCAGTAGCCAAGAGGCGATGCAGGTGTGGGTGGACTAT
GACAGAGAAAAGATGCAGATCGATGTTACGATGGCAACCCTCGACATGGC
CACCAAGCCCAAGAGACCAACAGTATCCACCAGGTACAACCTCTCAGATG
TGCTCAACGATGTCGCATACATCGGGTTCTCATCTTCAACAGGCAAGATA
AACACACATCACTATGTGCTCGGTTGGAGCTTCGCCATAAACGGTCCTGC
TCCAGCCATCAATCTCACCATGCTTCCAAAGCTTCCACGACATCATCCCA
AGGATCATCGATCCTGGGTGCTAGAGATAGTTCTGCCTATAGCAACCGCA
GTGGTCCTTCTGTCTTTAGGTGCCATTGCTTTCTTTCTTGTGCGAAGGCA
TTTCAGGTATGCAGAGGTACAAGATGACTGGGAGGTGGAATTTGGCCCAC
ACCGGTTCTCGTACAAGGATTTATACCATGCAACTGAAGGATTTGAGGAC
AAAAACCTTCTAGGAGTTGGAGGATTTGGGAGAGTGTACAAAGGGGTGCT
CCCGGGGTCCAGATTGAAGATAGCCGTGAAGAGGGTGTCACATGATTCCA
AACAAGGCATGAAGGAGTTCATCGCAGAAATCGTCAGCATCGGCCGCCTT
CAAAACCGTAATCTTGTGCAGTTGCTTGGCTATTGTCGGCGTAAAGGCGA
ACTCATCTTGGTATATGAGCACATGCCCAACGGAAGCCTCGATAAGTACC
TCTATGGCAAAGAGGAAACCTCCGTGTTGAGTTGGGCTCAAAGGTTTTGG
ATCATCAAGGGAATTGCATCTGGCTTGCTTTACCTCCACGAGGAGTGGGA
GAAAGTGGTTGTTCATCGAGACATCAAGGCAAGCAATGTTCTCCTTGATG
ACAAGATGAATGGGCGATTGGGTGATTTCGGTCTTGCAAGGTTGTATGAT
CACGGCATCGACCCACAGACTACAGATGTGGTTGGCACCATAGGCTACCT
AGCTCCAGAGCTAGCACGCAGCGGAAATGCCACTCCTCCTACTGATGTCT
TTGCCTTCGGCATGTTCATTCTTGAGGTCACCTGTGGACAAAGGCCTGTC
AATCACCAAAACACAGAAGACAATCAGCTCATTTTGGTCGATTGGGTGAT
CGACAAGGTGCAGAAAGGAGCATTCAGTGATACACTAGATCCTAGGCTAA
GAGGGAGTTATGATGTTGGTGAGGCATGTTTGGCGCTAACAATAGGGATA
CTATGCTCACACCCATTCGCCAAAGCAAGGCCTACCATGCGGCAAGTCAT
GCAATACCTAGATGGTGAAATTGAACCTCCAGAGTTAAGCTTCGAGATGC
TAGCCTTGATGCAAAACGAAGAGTTTGAGCCATACATCATGTCATACCCT
TTGTCAACTACAAGCATAGCCACAATGCCCCACCTCTCAGGAGGAAGATG
AGCATCGTATTTTGTCATGTCTGATATCCAAGTATATTAGTAATAAATTA
CATTGAGGAATATATATATATTGTAAATGTGATGAAGCATATATAGGAAG
CCTATATATACCTTGCAAAAAAAATATAGGAGTTATGATATTTTGGTTTG
TTTGTAAAAACATCACGTGCTTATTTTGATGTCTGCATCCAGATATGTTG
TGTATTCTTTCTGCTGCTTCTTATCCTGCGCCATACATGGTTTTGTATTG
GTTTGTTTGTAAAAACATCACGTGCTCATTTTGATGTCTGCATCCAGATA
TGCTGTGTATTCTTTCTGCTGCTTCTTATCCTGCAACATACATGGTTTTG
TATGAGAACCTCCTCTTAAGTAATTGATTTCACTGGTGCCAAAAATCACT
AAAATTGAATTTATAAAGTCTTTTGCCAACAAGTGTTCACATCATTCATA
TGGAGTATGCTTGTTTTTGTTTATAACAATTCATGTATGCCATTTGGGAG
AACCACAAGGCCAGAAGGATGAAAAAACTGACAAGACAAACGAAGACATG
ACTTGTTCATTCCACCGGAAATCCACATGTACTCTATCTGTCAAGAACAT
TTAGCACTTTGGATAGGCAATTTTGGTGGGCAAAGGGTAAAACTCCAAGG
ATTATATGTAAGTAATCTATGAGTACCTAGGATTCTTTGCAATTCTGTTA
TAAATAAAGGTATAACAATATCTCCATGTTCCGTAAAAACAATATATAGG
TTCAGTTCGCCACACATATGCAAAAAAATATGCTAACTAAATTACAACAG
TTGCATGTTTAGAAAGTAAGAATTTTATCGAAAAGACTTTGATTTTTGCA
CTATTTGGAAGAAAAAACCATAACCTAATTGGGTTCTAAGTTGTTTGAGA
AATGCATGTATAGCAAGTATGTTGAAATCATAAACGTGCAATACCATTCA
GCTAGTTTATATTTAATGACTTGATTAACATTTAAAAACATCACTTGATG
ACCGATTCAGTCTGCAACATAAGTTGTCTCAAAGGCCAAAATCATTGCCA
TGTCAAAGAAAGCAACTTCAATGGCAAGTGGCAATAAGAATCAAAGTGTA
AAACACGAGATGTTGAATGTTTCTTGTGTGGGAGCTTTCGGCACTGGGTA
CGCCCTTTTCTCGTAAACTGAGAAGTTATTTTTTAGATGACATCTTGTGT
TTTAATGAGAATTTTATAAGCTACAGTCAACATTTTGGGCTAGACCAGAA
GCCAGAGAAAAATTATACATGAGGATACACAGGTATTCCACAGAATGCAA
CTAAGCTTACTACTACTATAAACTCAATTATTGGAATATATTAGTATCTC
TTCGTTGGGTGAGAAATATTGCTAGAACAAATATCTATCCATCTTTCAAA
AAAACAGGGATTAATAATTCTTTTGGTGGCTTAAAAATAAGCCGCCTCTT
CCCTAACTTCTACCATAAGCCGGTCAACTTATTACTTGGGGCTTCTAAAT
TAGTTATGAGATAACTAGTTTGGAAGCCCCAACTAATAAGCTGGGCAGTT
TATGGGAGAAGCTGGAGAGGGAGTGGCTTATTTTCTAAGCTGTCAAAAGA
ACTGTGCCTTTCACCCCCAGCCTTATTGAAAAAATCTGACAAGGAAAAAC
CAAGCTGGATGTGACTTGTTGATTCTGCCAGAAATCTACTTATATTATAT
CTGTCAAGAATTTTTAGCACTTGGGATAGGCAATTTTGGTGGGCAATGGG
TAAAACACCAAGAATTTTATTTTAGCAATATAATTACCAAGGATTCTTTG
TAATTTGGTCATAAATAAAGGTACAACAATATCAGAATGCTCCGTACAAA
CAGTATAACAATTCGCCACATATAAGAAAAGAAAATATTATGCTAACTAA
ATACAGCACTTTCCTATTTAGAAGGTAAGAATTTTACTGAAAAGAGTTCA
CGTTTTGCATTAATTGGAAGGAAAAAGCCGTCGCATAATAGGGCTCTAAG
TTGTTCGAAAAATGCATGTATAATAAGCATGTTGAAATACTAGCCATGCA
GTACCATTCAGCTAGTTTGTATTTATTGACTTGAGGGATTAAAATTTTGA
AACCTCACTTGATGACCGAATCAGACTGCAATATAAATTGACTCCGAAGG
ACAAAATAAGAGTCATGTCAAGAAAGCAACTTCAGTGGCAGGTGGCAATA
AGAATCAAAGTGTAAAGCACAATACGTTGAATGTTCCTTTTTTCCTTTTT
GTGAACTGGGATATTATTTTGTAAACTTCAGTCAACATTCTGGGCTACAC
CAGAAACCAGAGAAAAATTGGTAGGCTTCAAAGGCTCCTCATACATGTGG
CTACACAGGTTTTCCACAGAATGCAACTAATATTACTACTACCATAAACT
CAATTATAGGAATATATTAGTATTTCTTTGGTGGGTGAGAAATATTACTA
GAACACATATCTATCCATCTTTTAAAAAAAGGACTTTCACCCCCAGCCTT
AATGAAGAAACAGATGCCCGGTACTGATTACTGGCAACAATTCTAAACTA
CAGCTAGGCGCTCTCTTCAAAAAAACTGAGCATATTCAAAAGCCCACTCT
ACTGAATGTGTACAAAAGATATTTGTGGTAAGTACTACTCTGGACTTGGC
ACTCTGAAGTCTGAATACCCAACTATTGAGTTCCCTTGATCCTAGGTGAT
GTTCACATCTCACAGTCAGACAAAGAATAATGTATGGAAAAATCGTACTA
GGACCATACTTACGTATACTATTTGAACAAACAGTCCATATCATAGGTAC
ACATCAAAGCTTTGCAAGTCGCAAGAAGCTTCATTTTTGGTTATTTTCCA
ACTTCAAATGCAATTGTCTAATTTTGTTCCGGTTCATTTGACTTGACAAA
ATACTACAGTATAAAAGTTGTGTTAGGATCCTATGCCTTTGCTGCAAGCG
AACATCAATGTTAGACTAGTTCACACATCCCTGCCCAAGGTCTTTGAGTC
GCCGAGCCAAGTCAAGACGCCAGCCCTCCAGCTTGGCGATTAACCGACAA
AAGTCACTTAATAGTCATGAGCTGCCCTGATTTTGAGAAAACGACTTGAC
GACTAGCGACTCAAAAACCTTGTCTCCATCTTCGAATGTAATTTTCCAAT
TTGGTTCAAGACCATTTGACTTGACAAAAGACAACAAAAGTTTTGTTAGG
ATCCTCTGCCTTTGCTGCGAGGGAACAGCGATGTTAGACTACTTCACATA
TCTCCATCTAAACGTCATTAGTCACTATCTTAGCTAGACAGAGCTTTTTG
TAAAGCTTGACAGTCTTTACAAATCTTGGATGGAACCAGAAATGCTAGAG
AATGCTCCCAAGGTTTCTAGCCTTTTGAGGGCAAAATTGGTGGTTCTTTA
TAGAAATTTTAGTTTGGATTCATAACTTATGTACAAATATGAAATATGCT
TTTCGTAGGAGGATTTATAAGGGTAAGCAGAGACATATAGCCCACACACC
CCACTAAACGGACACAACCGCTGCGCATGTCCCATCTGGAACCAGATCCT
CTCACTTACATAAGGAAAAATAGAGAAGCTACAATACTCTAACTTGCCTT
CTTTAAAGCCATATAATTAAGACTAATATGCTTTAAATTAATTTGCATAG
TACAAATTTACGGTTTACATTTACAAAAGATACTTACAACCAAAACTTTG
ATGTAACAAATTTTTAGTTTGGAGTATTATATATCTACAGTAATTACCTA
CAATATTAACTACCTTGCATAACCTGCTATATTCTTGATTTCCTGTGACT
TTCCTTATGTAAGTTAGTGGATCTGGTTCAGTCCCATCTATGCCAGGAAA
TTAATCTAAACTACCTGACATTTCCTTACTACATGCTATGGTAAATTAAT
CAAGAGATCGACAATATTTGTTACGGTGTTTCTTAAATCAATCCGAAGAT
GTGATTGACGATAACCTATATAAATATCACTGTATCCATTAAATATTGCA
ACTTCTAGGCAAAGGTAGATGTTGAAAAAACAGAGAGTAGACTTGCAAGT
CACACACTGAGTAGACAAAGATGGATGCTCCAAGGTACTTACAAAATGAA
GTACTGGACCACCGATTGCAACCTGAAACTATATACCCTTACTTGCCCAT
GAAACACCTACCTCTCCCATGCTTCTTGTTGAACTGTAGCTTGCAAGTCA
CATGCATGCCTGCCATGAAGTATACATCCTTCCTTCAACACTTCCTCTTC
CTGCTTGGTCTTATTGTACCAACCTTGGCCTCTGGTGATGACCAATTCCT
CTTCTCTGGCTTCAACAAATCCAGCCTAACCCTCGATGGTTGTGCCGCGG
TCACAGACACTGGCCTCCTTGATCTTACAAATGACACAAGTGGTCTCAAA
GGGCACGCCTTCTACCCTACTCCTCTGCACTTCCGCAAGTCGCCCGGTGG
TAAAGTTCAATCCTTCTCAGTCAATGTAGTTTTCAGCACCTTCATCACAT
ACCAAGACTTGAGCGCTGAAGGCATGGCCTTCTTCATCGCCCCCACTAAG
AATTTCTCTGATGCACGGGCGCCCAAGTACTTTGGCCTCCTCAACGAGAA
GAACAATGGCAACACAAGCAACCACATCTTCATGATCGAGCTCGACACCT
ACAACAACGCTGAGCTCCAAGACATCGACGACAACCACCTCGGGATCAAC
ATCAACAGTGCAATCTCCTTGCAATCCAGAACATCTGGCTTCTATGAAGA
CGAGAGTGGTGCCTTCGAGAACATGATGCTGAACGGAAACAAGGCTATGC
AATTGTGGGTAGAATACGACGAGAATGATATGCAGATCAATGTGACCTTA
GCTCCAATCAACATGCGCAAACCATCAAGGCCACTGCTCTCTGCAACCTT
TGATCTCTCAACTGTACTCTTTGACTCAGCTCAATACATTGGATTCTCAT
CCGTATCTACTCCCATCAACACCCGTCAGTACGTTATGGGCTGGAGTTTT
GGCATGAATAGACCAGCTCCATCCATTGACATCTCTAAGCTTCCTAAGTT
ACCTCTTGCTGGTAGAAGGGCCCATTCCAAGCTCTTGGCGTTCGTCCTAC
CAGTAGCCACTGCAACATTGATCCTCTCTATGGGCACTCTTTTCACTCTG
GTTGTGCTAAGGAGAATGAAGTATGCTGAGGTGCGTGAGGATTGGGAGGG
AGAGTTTGGCCGCACCGGTTCTCATTCAAGGATTTGTTCCATGCTACAGA
AGGGTTCAAGAACAAACACCTACTTGGAGAAGGAGGTTTTGGGAAAGTAT
ATAAAGGAGTCCTTCCATTGTCTAATGTGGAGATTGCTGTGAAGAGGATC
TCCCATGAGTCAAGACAGGGGATGAAGGAGTTTGTCACAGAGGTTGTTAG
CCTTGGCAGACTCCGCCATCGCAACCTTGTGCAACTACTCGGCTATTGCC
GTAGAAAAGGTGAACTATTTTTGGTTTATAAATACATGCCAAATGGTAGC
CTTGATAAATATCTACACTGTGAAGAGCACAAGGCCATTTTGAATTGGGT
TGAGAGGCTTCGAGTAATCAAAGGGATTGCAACCGGCTTGCTCTATCTCC
ATGAGAAGTGGGAGAAAATAGTAATCCATAGAGACATCAAGGCAAGCAAT
GTACTCCTGGATGGTGAAATGAATGGGAGGCTTGGTGACTTTGGCCTTGC
CAGGTTATATGATCATGGCACTGACCCACAAACCACACATATTGTTGGTA
CGAAGGGGTACCTAGCCCCTGAGCTACTACGGACAGGGAAAGCATCCCCT
CATACAGATGTTTTTGCCTTCGGCATGTTCCTTCTCGAGGTTGCATGCGG
GCAAAAACCTGTCAAGAAAAATGCAGAGGGAAATGAGGTTTTCTTGGTCG
ATTGGGTACTTGAGCACTGGAACAGTGGGTTAATTACCGAGACAGTGGAT
ACCAGGCTCCAAGGCGACTACAACATTGAAGAGGCATACCTCGTGTTAAA
TCTGGGACTTCTGTGCCAGCACCCGTTCCCTGGTTCAAGGCCTGGGATGC
GAGAAGTTATGCAGTACCTCGACGGTGATATGCCACTTCCCGAGCTGAGG
CAGACGCAGGTGAGCTTGATGAACATGGAGGCCTTGGTGAAAAGCAATGT
ATCAGACTCATCTGCCGTGTCATATCCGCAAATAACAACGAGCTTCGGCA
CAGTATCTGGCCTCTCAGGGGGGAGATGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.