GrainGenes Sequence Report: CL524684

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Sequence

CL524684

External Databases

Data at GenBank

Data at EMBL

Data at DDBJ

DB Remark

Locus Source: Avena sativa (oat)

Keyword

GSS

Species

Avena sativa

Cultivar

SunII

Clone Library

UMN genomic dna from oat

Data Source

genbank	Release 141, Apr 15 2004
genbank	Downloaded 2008-2009

Title

As04_umn5032_C UMN genomic dna from oat Avena sativa genomic clone As04_umn5032, genomic survey sequence.

Clone

As04_umn5032

Probe

UMN5032

Remark

DB_xref: taxon:4498

Feature: source: mol_type = 'genomic DNA';

Feature: source: mol_type = 'genomic DNA'

Locus Comment: Contact: Stephen J. Molnar; Eastern Cereal and Oilseed Research Centre; Agriculture and Agri-food Canada; 960 Carling Avenue, Bldg. 20, Ottawa, Ontario, K1A 0C6, Canada; Tel: (613) 759-1687; Fax: (613) 759-1701; Email: molnarsj@agr.gc.ca; Class: PSTI fragment.

Note: Vector: pUC18; Site_1: PstI; Site_2: PstI; Fragments (cut with PstI) were size selected (0.5-2 kbp) and cloned into pUC18. Note: UMN clones designated greater than 5000 are from this genomic library. Others are from a different cDNA library. Library was made at University of Minnesota. Ref: O'Donoughue et al (1995) Genome 38: 368-380.

DNA

awsgrggtbrkwaccggggggtsstctagagtcgacctgcagctgctgag
taactcgctgaatctctagtttggctctatcgatgatgtcttggatctgt
cgccgtgtgtcggcgatatcggtccggaacttgcgttgagcatccatcct
aaggataccagcctgctctgggtatacgtccattgctgagtttccaagct
gtagatctagctctctcttgtatgcctcgagacggttcgccgtctgctgt
ttctgcgcggtctggtcaccatcagtagggtggtttgtgcagcagcaggg
gtcgtagcacccggctgatctgaatattgtgtggtgcctcctcatgtcca
gagtgagtaccaactggtgggcgtcaccgtactctttcgcgtccaggcga
gctttcatcaggcgttctttggcaatcttccgatcatcgccctcaggagg
aagcagcgctasctgcrgattttggttggagtgaactcctccagacagtt
catcaggttgtggcacttgtgcacttcctccttgatagcactcaggtctc
tcttcttccaaagaaggatgtcgtagtttgcratctcaaccctttaaatt
tggtagcccaactggggagctccggtgtccagttcctgtagtactagtag
tagcttttcgcatgaatcgagatccgcgtacgtcatgaccgtcaccacga
ggctcgtrccggctggccgtcgatcggcacccaacgtacaagcatctacg
aacactgtgtagtctgcaaatttgatgaaatctctgctgccttgatgcgg
gacgattacgtggtcctctactccgtggaggccggtgaagccgttggacc
cgtcaatggcgtccacgaagcatcctttgagcactacgtcgaggggaatg
ttgtgctcttcggccacggcccttgccgtctccagatctagcccctcccc
ggtcacctgccacttgaccgtcgctgtcatggctgcagaatacacaaaak
aaattcttggtgaaaaattcccgtcaaaattctggcttttatcataacgt
acagatcctgtaaatttcaatctgtcgtccatccattttttttgcaattg
cgcataagcgccatattctctgtagtcgattgggccatcatagtcagtaa
agattgttccttctgaattcatgatgtattttctccatgaaccaccaacc
tgaatttctgcaaattcgatgatatctttgaaattatwatttatatctga
atgatatagttttgattgatcaataaattttgccccctgtgttaagtcag
gattagaagtwacagttgcaagtgcattagtaaattgtgcagatcccggc
tcaaatcttggtaatcttggagcgtctggattaagaggatctgtatttgg
tactaatggtaaattcggcgaaacattataatctgcaaaagtnmtggcat
aattagcagcatcatttgcattaagaccaagtachvcavs


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