GrainGenes Sequence Report: Ta.21072.1.A1_at
Sequence
CK166527
Contig
Ta.21072.1.A1_at
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC283895
NCBI UniGene
Ta.21072
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001060734.1 Os07g0693900 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Wheat line CI 14106
Clone Library
Triticum aestivum FGAS: TaLt7
Data Source
genbank Release 139, Dec 15 2003 genbank Updated Nov 2006
Title
FGAS050680 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA, mRNA sequence.
Strain
lab_host DH5 alpha
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Wm L Crosby; Bioinformatics; University of Saskatchewan, Department of Computer Science; 1C101 Engineering Building, 57 Campus Drive, Saskatoon,; Saskatchewan, S7N 5A9, Canada; Tel: 306 966 1769; Fax: 306 966 2033; Email: fgas_ests@cs.usask.ca; This sequence is the direct result of the Base calling software; Phred (default parameters). It is the raw base calls. To aid in the; identification of the high quality insert the software Lucy; (default parameters) has been run on this sequence. Lucy identified; the region [64,845].; Plate: TaLt709 row: E column: 13. Note: Organ: Crown; Vector: pGEM-T; SSH (suppression subtractive hybridization) cDNA library from genotype CI14106 cold hardened at 2 C for 21 days and 49 days (equal amount of cDNA pooled together before subtraction, tester) and subtracted against genotype CI14106 non-hardened (20 C) (driver). Nitro-pyrole anchored oligo-dT priming and non-directional cloning.
DNA
gctatgctccaacgcgttgcccgcgcctcgtgaggtcgacctgcaggcgg
ccgcactagtgattagcgtggtcgcggccgaggtaattcacaacattttt
ataacaaaccttgtttaatgttctacatgccactttagtggactggaata
caggctaccgaaacagatagacaacagggcgaacaactttcactttttcc
taccactattatcaaatgtttagtgtaatataaatgttgtatacaaatcg
cgcagcagctaaacattgcttcgccgcatggtcttgccatgccatctttc
ccagtactacattaatgcgggtatcgctttgtcgcctgccaaatgcctcc
attatgttccagcaaatacacaagaggccgggggctgcaggggatatgtc
aactggcggcggaggattcctgggttacttctgtcgtggcctctgcggcg
gagctgctggtctccgcggcctggttctggctgctctgcgcctcgggtgc
aggctgctgctgttgatcttcagcgaggcccagaaccaccaagctagacc
tcgggagagtcgatcgaacgtttggctggctggcatgctcgaccaggggc
gccttcagtacagggttcttattcagcgcattttcgagttgtggagctgg
taactgcagtaacacaccataggactgaggctttgtcaggatagcacact
tcaggaatcctacccataacttcggatatttccatatctgcttgctaaca
aggcgtgacatgatctccattacaaaatccaccaaggcaggaaatgcact
tatcgcttgcataacagttcgcatgaacagcaaaggaaggggaatctgtt
canccagttggtttagtgcttttgccaaaacttgctgagtgaatgttgtc
ctttgctcgaagcagggagcacatgcatccataaccttttccagtggtat
tccttctttttcaggatctattacttgaatcgccatcaaaatttctgatg
ggtcaagattagggccatgttgtggtgatccctgcaggattcgaaaaagg
ccaactgaaacttatccaccggaagattaccatattggaaaaccaaacag
aatttcaccttttgggcaattagccattcctgggaaagggacctcaattc
ttta
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: Ta.21072.1.A1_at
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||