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GrainGenes Sequence Report: NSFT03P2_Contig10639

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Sequence
CD373608
Contig
NSFT03P2_Contig10639
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC346388
wEST map position
CD373608
NCBI UniGene
Ta.54243
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Ribosomal protein L19'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
4AL
4BS
Clone Library
CS wheat etiolated seedling root cDNA library
Tissue
Root
Developmental Stage
Five day old etiolated seedling
Data Source
genbankRelease 136, Jun 15 2003
genbankUpdated Nov 2006
Title
WHE0433_c06_e11zT CS wheat etiolated seedling root cDNA library Triticum aestivum cDNA clone WHE0433_c06_e11, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE0433_c06_e11
Probe
WHE0433_c06_e11
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer.
Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Seeds were surface-sterilized , germinated and grown aseptically in the dark at room temperature on filter paper with water, nystatin and cefotaxime in covered crystallization dishes. Roots were harvested. The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Seeds were surface-sterilized, germinated and grown aseptically in the dark at room temperature on filter paper with water, nystatin and cefotaxime in covered crystallization dishes. Roots were harvested. The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
tttttttttttttttttatttttttttttggccacaaaatttcgtgagga
cttgcataataaagtgaattacaaatacagggcgccggtagaattgaaac
acacaccgacacacgacacacaccgacgcatgaggtgtgggagccactgc
atgaacagcaaccccacttattcaggcacgcggaagcttagcacgcagag
aaaatcacgcacgggcgagcacgagaccgggcccgcgtcccagcctctct
cactttatggaacacacgtaacgtaagcacacgcacggccggcggcgagg
ccggccaccgcacgtcaacgacgatctagccgaagtggtggtgcttcttc
tcgccgctggcctccttggcctccttgtggtcctgcttcttctcgtggtg
ctcgtggaatctcggtcagggagagcaagaagaagtcaacaaatgatgct
ctgccagtttcacagatgccagataaggagactgaaccacttttggcaac
caaagacggcagtgatatcaagaaggcaaatggtgtatctcacggctgct
aagacttcatttgcttagtgtagatatagtattcacgtctgcccttcgag
tttcaatgatctggaaagccattt

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