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GrainGenes Sequence Report: CD373475

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Sequence	CD373475
Contig	Ta.2891.1.S1_at Ta.2891.1.S1_x_at NSFT03P2_Contig14015
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC297084
wEST map position	CD373475
NCBI UniGene	Ta.2891
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001042378.1 Os01g0212400 [Oryza sativa (japonica cultivar-group)]'
Keyword	EST
Species	Triticum aestivum
Cultivar	Chinese Spring
Chromosome	3AS 3BS 3DS
Clone Library	CS wheat unstressed etiolated seedling shoot cDNA library
Tissue	Shoot; etiolated
Developmental Stage	Five day old seedling
Data Source	genbank Release 136, Jun 15 2003 genbank Updated Nov 2006
Title	WHE0334_F12_K24ZT CS wheat unstressed etiolated seedling shoot cDNA library Triticum aestivum cDNA clone WHE0334_F12_K24, mRNA sequence.
Strain	lab_host E. coli SOLR
Clone	WHE0334_F12_K24
Probe	WHE0334_F12_K24
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Seeds were surface-sterilized , germinated and grown aseptically in the dark at room temperature on filter paper with water, nystatin and cefotaxime in covered crystallization dishes. Shoots were harvested. The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Seeds were surface-sterilized, germinated and grown aseptically in the dark at room temperature on filter paper with water, nystatin and cefotaxime in covered crystallization dishes. Shoots were harvested. The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA	tttttttttttttttttttttttagaccttaagatagattcatggataca caatgcacaccgtggatatgaacacaataaacacctcgaagtctagacag ataaattacaatgagtcaaaaatcatgacagcatcaaactcaagcgtgtg tccagactagaagaatgggcctatgaccagccgaagacgaagtcgagaac gtagacgacggcgagggtcagagggtacagcaggtaggccaccaggcagg tccagagcgggaagctggtccggaagcttgtgaagagtcccatgatgaca cagacgagcaggatgacgagcacctccgaggagaagtcccacgtcagctc cctgaagtagatgagcgccaagaacacgcccaggcacagtgtgttgttca tggtcacgccgccgtatacctctgagaaagtgagggagcaagtcctctgc ttcttcctgctggcgaagatgatggccgagacggcctcgctggaattggt tgccagcgggaggccgatgaacgagacaaagaaggacgggatgtgtgtgg cgttagagaagttgtggacagcatcaacaagcgggtctgcaaatgcggca caaatggtagcgccgagaagcaggtacccacggccttggcaatgcaccag ccagggttctcgacgctctccactgcctcgtcaga

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