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GrainGenes QTL Report: Qyr.wpg_GWAS-1B.2.2

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QTL	Qyr.wpg_GWAS-1B.2.2
Trait Affected	Reaction to stripe rust
Ontology	TO:0000439 Planteome fungal disease resistance TO:0020055 Planteome wheat stripe rust disease resistance CO_321:0000179 Planteome wheat stripe rust plant response trait
Gene Class	Reaction to Puccinia striiformis Westend.
Chromosome	1B
Positive Significant Marker	IWA2707
Species	Triticum aestivum
Comment	In Naruoka et al, IWA63, IWA2583, IWA2557, and IWA2707 were listed as significant markers for Qyr.wpg_GWAS-1B.2 in Table 1. In 2022, sequences for these markers were BLASTed against the 2018 IWGSC v1 genome. Qyr.wpg_GWAS-1B.2 listed IWA8557 as a significant marker. At 16MB, it clusters with Qyr.wpg_GWAS-1B.1.1 and was moved to that qtl for this curation. The remaining three clustered into two groups, IWA63 and IWA2583 are at 28MB and IWA2707 is at 50MB. These were therefore split into two QTL: Qyr.wpg_GWAS-1B.2.1 and Qyr.wpg_GWAS-1B.2.2 .
Reference	Naruoka Y et al. (2015) Genome-wide association mapping for stripe rust (Puccinia striiformis F. sp. tritici) in US Pacific Northwest winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 128:1083-1101.

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