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GrainGenes QTL Report: Qyr.wpg_GWAS-1B.1.2

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QTL	Qyr.wpg_GWAS-1B.1.2
Trait Affected	Reaction to stripe rust
Ontology	TO:0000439 Planteome fungal disease resistance TO:0020055 Planteome wheat stripe rust disease resistance CO_321:0000179 Planteome wheat stripe rust plant response trait
Gene Class	Reaction to Puccinia striiformis Westend.
Chromosome	1B
Positive Significant Marker	IWA1958-1B IWA1957 IWA5301
Species	Triticum aestivum
Comment	In Naruoka et al, IWA6621, IWA4678, IWA4679, IWA7331, IWA4715, IWA1958, IWA1957, and IWA5301 were listed as significant markers for Qyr.wpg_GWAS-1B.1 in Table 1. In 2022, sequences for these markers were BLASTed against the 2018 IWGSC v1 genome. Physically these clustered into two groups, one clustered around 17MB, the other tightly clustered at 67MB. These clusters were therefore split into two QTL: Qyr.wpg_GWAS-1B.1.1 and Qyr.wpg_GWAS-1B.1.2 .
Reference	Naruoka Y et al. (2015) Genome-wide association mapping for stripe rust (Puccinia striiformis F. sp. tritici) in US Pacific Northwest winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 128:1083-1101.

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