Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes QTL Report: QSpsm.OGxM1-1B

[Submit comment/correction]

QTL	QSpsm.OGxM1-1B
Trait Affected	Spikes per area
Synonym	QTL1345_1B-Golabadi_et_al._2011
Ontology	TO:0000443 Planteome ear number
Trait Study	Yield under drought, Oste-Gata x Massara-1, Golabadi2011
Chromosome	1B
Positive Significant Marker	IWA7572 IWB52662 gwm11-1B
LOD Peak Location	gwm11-1B
Phenotypic R2	6.42
Species	Triticum turgidum ssp. durum
Parent	Oste-Gata Massara-1
Comment	Curator Note (VCB, 04/2019). QTL names and markers associated with this QTL are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate this QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
Reference	Golabadi M et al. (2011) Identification of microsatellite markers linked with yield components under drought stress at terminal growth stages in durum wheat. Euphytica 177:207-221.

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.