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GrainGenes QTL Report: QAa.StMo-5H

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QTL	QAa.StMo-5H
Trait Affected	alpha-amylase activity
Ontology	TO:0000288 Planteome alpha-amylase activity GO:0004556 Planteome alpha-amylase activity
Gene Class	alpha-Amylase
Map	Hordeum-OWB-OPA2008-5H
Map Data	Barley, OWB, OPA2008
Chromosome	5H
Positive Significant Marker	mSrh ABG473 11_11473 11_10414
LOD Peak Height	5.2
LOD Threshold	2.5
Phenotypic R2	22.7
Higher Scoring Allele from	Morex
Species	Hordeum vulgare
Parent	Morex (barley) Steptoe (barley)
Comment	ABC717, the other significant marker for QKp.HaMo-5H.1 maps 3.47 cM north of mSrh on Barley-Consensus2005-SNP-5H Trait at Barleyworld = Alpha amylase QTL_analysis_method = Map-Maker QTL
Reference	Mohammadi M et al. (2015) A genome-wide association study of malting quality across eight US barley breeding programs 128:705-721. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Zwickert-Menteur S et al. (1996) Amy2 polymorphism as a possible marker of B-Glucanase activity in barley (Hordeum vulgare L.). Journal of Cereal Science 24:55-63.
Data Curator	Carollo, Victoria 2007.03

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