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GrainGenes QTL Report: QAa.StMo-2H

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QTL	QAa.StMo-2H
Trait Affected	alpha-amylase activity
Ontology	TO:0000288 Planteome alpha-amylase activity GO:0004556 Planteome alpha-amylase activity
Gene Class	alpha-Amylase
Map	Hordeum-OWB-OPA2008-2H
Map Data	Barley, OWB, OPA2008
Chromosome	2H
Positive Significant Marker	Chs1b ABG008 12_30155 11_10943
LOD Peak Height	4
LOD Threshold	2.5
Phenotypic R2	18.9
Higher Scoring Allele from	Morex
Species	Hordeum vulgare
Parent	Morex (barley) Steptoe (barley)
Comment	PBI21, the significant marker for QGN-BlE2-2H, colocalizes with ABG8 on Hv-Consensus2006-Marcel-2H QTL_analysis_method = Map-Maker QTL
Reference	Mohammadi M et al. (2015) A genome-wide association study of malting quality across eight US barley breeding programs 128:705-721. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Zwickert-Menteur S et al. (1996) Amy2 polymorphism as a possible marker of B-Glucanase activity in barley (Hordeum vulgare L.). Journal of Cereal Science 24:55-63.
Data Curator	Carollo, Victoria 2007.03

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