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GrainGenes QTL Report: QAa.StMo-1H

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QTL	QAa.StMo-1H
Trait Affected	alpha-amylase activity
Ontology	TO:0000288 Planteome alpha-amylase activity GO:0004556 Planteome alpha-amylase activity
Gene Class	alpha-Amylase
Map	Hordeum-OWB-OPA2008-1H
Map Data	Barley, OWB, OPA2008
Chromosome	1H
Positive Significant Marker	ABG373 ABA2 11_10644 12_20599
Higher Scoring Allele from	Morex (barley)
Species	Hordeum vulgare
Parent	Morex (barley) Steptoe (barley)
Comment	ABG373, the significant marker for QAa.StMo-1H and QMe.StMo-1H.5 is a synonym for pilot OPA 2_0603. OPA2_0603 colocalizes with pilot OPA 1_0041 in the HarvEST barley integrated maps, 2008. Trait at Barleyworld = Alpha amylase QTL analysis method = QTL-STAT, an interval mapping program using linear models to estimate QTL parameters (B.H. Liu and S.J.Knapp, unpub.). QTL assessed with single and multilocua ANOVAs
Reference	Mohammadi M et al. (2015) A genome-wide association study of malting quality across eight US barley breeding programs 128:705-721. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Hayes P et al. (1993) Quantitative trait locus effects and environmental interaction in a sample of North American barley germ plasm Theoretical and Applied Genetics 87:392-401.

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