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GrainGenes QTL Report: QSdw.CoxLd-3A

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QTL
QSdw.CoxLd-3A
Trait Affected
Shoot dry weight
Synonym
QTL1535_3A-Maccaferri_et_al._2016
Ontology
TO:0000552Planteomehttp://browser.planteome.org/amigo/term/TO:0000552
Trait Study
Root system architecture, Colosseo x Lloyd, Maccaferri2016
Chromosome
3A
Positive Significant Marker
IWB72058
IWB40771
barc51-3A
LOD Peak Location
barc51-3A
Phenotypic R2
5.2
Species
Triticum turgidum ssp. durum
Parent
Lloyd
Colosseo
Comment
Curator Note (VCB, 04/2019). QTL names and markers associated with this QTL are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate this QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
Reference
ReferenceMaccaferri M et al. (2016) Prioritizing quantitative trait loci for root system architecture in tetraploid wheat. Journal of Experimental Botany 67:1161-1178.

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