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GrainGenes Probe Report: TraesCS5A01G096500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS5A01G096500
Locus	TraesCS5A01G096500.3
URL	Pfam PF01487 [ Show all 17 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|B9IYA1|AROE_BACCQ Human Readable Description: Shikimate dehydrogenase (NADP(+)) Pfam IDs Description: PF01487: Type I 3-dehydroquinase; PF08501: Shikimate dehydrogenase substrate binding domain; PF01488: Shikimate / quinate 5-dehydrogenase InterPro IDs Description: IPR001381: 3-dehydroquinate dehydratase type I; IPR006151: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; IPR011342: Shikimate dehydrogenase; IPR013708: Shikimate dehydrogenase substrate binding, N-terminal; IPR013785: Aldolase-type TIM barrel; IPR016040: NAD(P)-binding domain; IPR022893: Shikimate dehydrogenase family GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0003855 MF: 3-dehydroquinate dehydratase activity; GO:0004764 MF: shikimate 3-dehydrogenase (NADP+) activity; GO:0019632 BP: shikimate metabolic process; GO:0050661 MF: NADP binding; GO:0055114 BP: oxidation-reduction process
Type	Genomics
Sequence	TraesCS5A01G096500.1 TraesCS5A01G096500.2 TraesCS5A01G096500.3 TraesCS5A01G096500.4
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring