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GrainGenes Probe Report: TraesCS4D01G087100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G087100
Locus	TraesCS4D01G087100.5
URL	Pfam PF12215 [ Show all 13 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5XR61|A0A1D5XR61_WHEAT Human Readable Description: Non-lysosomal glucosylceramidase Pfam IDs Description: PF12215: beta-glucosidase 2, glycosyl-hydrolase family 116 N-term; PF04685: Glycosyl-hydrolase family 116, catalytic region InterPro IDs Description: IPR006775: Glycosyl-hydrolase family 116, catalytic region; IPR008928: Six-hairpin glycosidase-like; IPR014551: Beta-glucosidase GBA2-type; IPR018247: EF-Hand 1, calcium-binding site; IPR024462: Glycosyl-hydrolase family 116, N-terminal GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0004348 MF: glucosylceramidase activity; GO:0004553 MF: hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0006680 BP: glucosylceramide catabolic process; GO:0016020 CC: membrane
Type	Genomic
Sequence	TraesCS4D01G087100.1 TraesCS4D01G087100.2 TraesCS4D01G087100.3 TraesCS4D01G087100.4 TraesCS4D01G087100.5
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring