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GrainGenes Probe Report: TraesCS4D01G060100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G060100
Locus	TraesCS4D01G060100.1
URL	Pfam PF01189 [ Show all 10 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A0K9PFF5|A0A0K9PFF5_ZOSMR Human Readable Description: Ribosomal RNA small subunit methyltransferase F Pfam IDs Description: PF01189: 16S rRNA methyltransferase RsmB/F InterPro IDs Description: IPR001678: SAM-dependent methyltransferase RsmB/NOP2-type; IPR018314: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site; IPR023267: RNA (C5-cytosine) methyltransferase; IPR023270: tRNA (C5-cytosine) methyltransferase, NCL1; IPR029063: S-adenosyl-L-methionine-dependent methyltransferase GO IDs Description via InterPro: GO:0003723 MF: RNA binding; GO:0008168 MF: methyltransferase activity; GO:0016428 MF: tRNA (cytosine-5-)-methyltransferase activity
Type	Genomic
Sequence	TraesCS4D01G060100.1 TraesCS4D01G060100.2 TraesCS4D01G060100.3
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring