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GrainGenes Probe Report: TraesCS3D01G495000

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3D01G495000
Locus	TraesCS3D01G495000.2
URL	Pfam PF02837 [ Show all 25 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|R7W7Z3|R7W7Z3_AEGTA Human Readable Description: Beta-galactosidase Pfam IDs Description: PF02837: Glycosyl hydrolases family 2, sugar binding domain; PF00703: Glycosyl hydrolases family 2; PF02836: Glycosyl hydrolases family 2, TIM barrel domain; PF16353: Domain of unknown function(DUF4981); PF02929: Beta galactosidase small chain InterPro IDs Description: IPR004199: Beta galactosidase small chain/ domain 5; IPR006101: Glycoside hydrolase, family 2; IPR006102: Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; IPR006103: Glycoside hydrolase family 2, catalytic domain; IPR006104: Glycosyl hydrolases family 2, sugar binding domain; IPR008979: Galactose-binding domain-like; IPR011013: Galactose mutarotase-like domain; IPR013783: Immunoglobulin-like fold; IPR014718: Glycoside hydrolase-type carbohydrate-binding; IPR017853: Glycoside hydrolase superfamily; IPR023230: Glycoside hydrolase, family 2, conserved site; IPR023232: Glycoside hydrolase, family 2, active site; IPR032312: Beta-galactosidase, domain 4 GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0004553 MF: hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0004565 MF: beta-galactosidase activity; GO:0005975 BP: carbohydrate metabolic process; GO:0009341 CC: beta-galactosidase complex; GO:0030246 MF: carbohydrate binding
Type	Genomic
Sequence	TraesCS3D01G495000.1 TraesCS3D01G495000.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring