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GrainGenes Probe Report: TraesCS3A01G408500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3A01G408500
Locus	TraesCS3A01G408500.1
URL	Pfam PF00176 [ Show all 20 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: AT5G22750.1 Human Readable Description: DNA/RNA helicase protein Pfam IDs Description: PF00176: SNF2 family N-terminal domain; PF00271: Helicase conserved C-terminal domain InterPro IDs Description: IPR000330: SNF2-related, N-terminal domain; IPR000953: Chromo/chromo shadow domain; IPR001650: Helicase, C-terminal; IPR001841: Zinc finger, RING-type; IPR001965: Zinc finger, PHD-type; IPR002464: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR016197: Chromo domain-like; IPR019786: Zinc finger, PHD-type, conserved site; IPR019787: Zinc finger, PHD-finger; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0008026 MF: ATP-dependent helicase activity; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS3A01G408500.1 TraesCS3A01G408500.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring