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GrainGenes Probe Report: TraesCS2D01G290800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G290800
Locus	TraesCS2D01G290800.4
URL	Pfam PF02922 [ Show all 17 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A103XPQ0|A0A103XPQ0_CYNCS Human Readable Description: 1, 4-alpha-glucan-branching enzyme Pfam IDs Description: PF02922: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); PF00128: Alpha amylase, catalytic domain; PF02806: Alpha amylase, C-terminal all-beta domain InterPro IDs Description: IPR004193: Glycoside hydrolase, family 13, N-terminal; IPR006047: Glycosyl hydrolase, family 13, catalytic domain; IPR006048: Alpha-amylase/branching enzyme, C-terminal all beta; IPR006407: 1, 4-alpha-glucan-branching enzyme, GlgB; IPR013783: Immunoglobulin-like fold; IPR014756: Immunoglobulin E-set; IPR017853: Glycoside hydrolase superfamily GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0003844 MF: 1, 4-alpha-glucan branching enzyme activity; GO:0004553 MF: hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005975 BP: carbohydrate metabolic process; GO:0005978 BP: glycogen biosynthetic process; GO:0043169 MF: cation binding
Type	Genomic
Sequence	TraesCS2D01G290800.1 TraesCS2D01G290800.2 TraesCS2D01G290800.3 TraesCS2D01G290800.4
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring