Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS2D01G279300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G279300
Locus	TraesCS2D01G279300.1
URL	Pfam PF07137 [ Show all 7 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|Q9AU61|Q9AU61_WHEAT Human Readable Description: Violaxanthin de-epoxidase Pfam IDs Description: PF07137: VDE lipocalin domain InterPro IDs Description: IPR010788: VDE lipocalin domain; IPR012674: Calycin GO IDs Description via InterPro: GO:0009507 CC: chloroplast; GO:0046422 MF: violaxanthin de-epoxidase activity; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS2D01G279300.1 TraesCS2D01G279300.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring