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GrainGenes Probe Report: TraesCS2D01G104400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2D01G104400
Locus	TraesCS2D01G104400.1
URL	Pfam PF00176 [ Show all 16 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|M8A0H2|M8A0H2_TRIUA Human Readable Description: E3 ubiquitin-protein ligase SHPRH Pfam IDs Description: PF00176: SNF2 family N-terminal domain; PF00271: Helicase conserved C-terminal domain InterPro IDs Description: IPR000330: SNF2-related, N-terminal domain; IPR001650: Helicase, C-terminal; IPR001841: Zinc finger, RING-type; IPR001965: Zinc finger, PHD-type; IPR011011: Zinc finger, FYVE/PHD-type; IPR011990: Tetratricopeptide-like helical domain; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR019786: Zinc finger, PHD-type, conserved site; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS2D01G104400.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring