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GrainGenes Probe Report: TraesCS2B01G622300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2B01G622300
Locus	TraesCS2B01G622300.1
URL	Pfam PF04997 [ Show all 22 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|W5AP12|W5AP12_WHEAT Human Readable Description: DNA-directed RNA polymerase subunit Pfam IDs Description: PF04997: RNA polymerase Rpb1, domain 1; PF00623: RNA polymerase Rpb1, domain 2; PF04983: RNA polymerase Rpb1, domain 3; PF05000: RNA polymerase Rpb1, domain 4; PF04998: RNA polymerase Rpb1, domain 5; PF04992: RNA polymerase Rpb1, domain 6; PF04990: RNA polymerase Rpb1, domain 7 InterPro IDs Description: IPR000684: RNA polymerase II, heptapeptide repeat, eukaryotic; IPR000722: RNA polymerase, alpha subunit; IPR006592: RNA polymerase, N-terminal; IPR007066: RNA polymerase Rpb1, domain 3; IPR007073: RNA polymerase Rpb1, domain 7; IPR007075: RNA polymerase Rpb1, domain 6; IPR007080: RNA polymerase Rpb1, domain 1; IPR007081: RNA polymerase Rpb1, domain 5; IPR007083: RNA polymerase Rpb1, domain 4 GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0003899 MF: DNA-directed 5'-3' RNA polymerase activity; GO:0005665 CC: DNA-directed RNA polymerase II, core complex; GO:0006351 BP: transcription, DNA-templated; GO:0006366 BP: transcription from RNA polymerase II promoter
Type	Genomic
Sequence	TraesCS2B01G622300.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring