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GrainGenes Probe Report: TraesCS2B01G353100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2B01G353100
Locus	TraesCS2B01G353100.1
URL	Pfam PF13450 [ Show all 22 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|Q5VNP6|Q5VNP6_ORYSJ Human Readable Description: Acyl-CoA ligase-like Pfam IDs Description: PF13450: NAD(P)-binding Rossmann-like domain; PF00501: AMP-binding enzyme; PF00550: Phosphopantetheine attachment site InterPro IDs Description: IPR000873: AMP-dependent synthetase/ligase; IPR006162: Phosphopantetheine attachment site; IPR009081: Phosphopantetheine binding ACP domain; IPR011004: Trimeric LpxA-like; IPR011614: Catalase core domain; IPR018028: Catalase, mono-functional, haem-containing; IPR020806: Polyketide synthase, phosphopantetheine-binding domain; IPR020835: Catalase-like domain; IPR020845: AMP-binding, conserved site; IPR023753: FAD/NAD(P)-binding domain GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0004096 MF: catalase activity; GO:0006979 BP: response to oxidative stress; GO:0008152 BP: metabolic process; GO:0016491 MF: oxidoreductase activity; GO:0020037 MF: heme binding; GO:0031177 MF: phosphopantetheine binding; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring