Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS1A01G349600

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1A01G349600
Locus	TraesCS1A01G349600.1
URL	Pfam PF15628 [ Show all 11 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A103YIA8|A0A103YIA8_CYNCS Human Readable Description: DNA glycosylase Pfam IDs Description: PF15628: RRM in Demeter InterPro IDs Description: IPR003265: HhH-GPD domain; IPR003651: Endonuclease III-like, iron-sulphur cluster loop motif; IPR011257: DNA glycosylase; IPR023170: Helix-turn-helix, base-excision DNA repair, C-terminal; IPR028925: Demeter, RRM-fold domain GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0006281 BP: DNA repair; GO:0006284 BP: base-excision repair; GO:0051539 MF: 4 iron, 4 sulfur cluster binding
Type	Genomic
Sequence	TraesCS1A01G349600.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring