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GrainGenes Probe Report: BE498665-5D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE498665-5D
Data at Wheat_SNP
BE498665-5D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP G>T; at 356
SNP T>A; at 296
SNP T>A at 255
Reference sequence ACACTGAAGCGAATGGAGAACTTGGTTCAGGATTTGCAAGATGAGCTGGAGATGAAAGAGGGGTTAACTGTGAAGGAATTGCCTAATGAAACGTCTGGTGAACTAGATGGTAAATCGACAACTGTCGAACAAAATCATCTTTACATACTTGTACTAAAAAGTTTGTGATCCTTTTTATTTTCCACTCCTGATAACAGATGGCAATATCAAAGCTCACACCCCTGATTCAATATCAATGAGCAAAATTGAAGCAGAACTTGAAGCCGAGCTTGCGAGGCTGGAGTTAAATATCACTTCAAACCACTTGGAAGAAGAACCGTTTGACTTGATTGAGGTAACAATCTCATATCAAAATGTTATGCATGGCATCTTAATTAGGCTACAGCCTACAAGCACACTAAATATAATTCCACATTTCTAGATCGATCAGGAGTTCATTGGAGATATTGTCCAGGGGGAACTGAAGACCGACATGAATTCTTC
Reference sequence TGAGCTGGAGATGAAAGAGGGGTTAACTGTGAAGGAATTGCCTAATGAAACGTCTGGTGAACTAGATGGTAAATCGACAACTGTCGAACAAAATCATCTTTACATACTTGTACTAAAAAGTTTGTGATCCTTTTTATTTTCCACTCCTGATAACAGATGGCAATATCAAAGCTCACACCCCTGATTCAATATCAATGAGCAAAATTGAAGCAGAACTTGAAGCCGAGCTTGCGAGGCTGGAGTTAAATATCACTTCAAACCACTTGGAAGAAGAACCGTTTGACTTGATTGAGGTAACAATCTCATATCAAAATGTTATGCATGGCATCTTAATTAGGCTACAGCCTACAAGCACACTAAATATAATTCCACATTTCTAGATCGATCAGGAGTTCATTGGAGATATTGTCCAGGGGGAACTGAAGGCCGACATGATTCTTCGTGACATTGCTGATTACAGCAGTGATAGTGACCATGGCAGGGACAGCAGACAAAGCTCCCCAGATTACACACATGAGACAAACTATCCCGTTTCACCTAGAGATCTCAGTC
Type
EST
SNP
PCR primers
BE498665B_R1 CGAAGAATCATGTCGGTCTTC
BE498665_cpF1 CACACTGAAGCGAATGGAGA
Sequence
NSFT03P2_Contig1128
Linkage Group
5D
Source Species
Triticum aestivum