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GrainGenes Probe Report: BE494848-4D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE494848-4D
Data at Wheat_SNP
BE494848-4D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP T>C;A>G;A>G;T>C;T>C at 208;394;405;575;746
SNP T>C;DEL;A>G;A>G;T>C;T>C at 112;288;298;309;479;650
SNP G>T at 181
Reference sequence ACTTCCTATCGATGACACAGTTGAAGGCATTACTGGAAACTTGTTTGACGCCTTCTTGAAACGTGAGATTTCTTCATCACTGAAATATTCTCCCTACCTTTTGTCATGGCCTAAGTTAGTTAACCTCCAGTGCTTAGCATGTCATCTGGGTTTTTCTAGTGTGCTGTTCACAACTTTGTTTATACAGCCTTTTAATGCCAACACCTTTGTTTATAAGTGTAAACAGATGGTGTTTCTCAGCTGTCATACTAAAACTGCTATTTCCCCCATGATATAGTATTTGTGTCTACCCTCTGAACTATCTTCATTGAAATAAAGAAATCCATTGTACCTATGCTACACTTTTTTGATGCTGCTGCTGATAAGAAATCTTGAAATGCCTTGCCATATTTTATTGGGACAATATACACTGCATGCAGTCCTTTTGTTGACATTGTATTCATCTGGTTTTTTCAGCTTACTTCCTAGAAGCTTACCGTCCTTTGAGGAAGGGAGATCTTTTCCTTGTGAGGGGTGGAATGAGAAGTGTGGAATTCAAAGTTATAGAGACAGACCCTGCAGAGTATTGCATCGTTGCACCAGACACCGAGATATTCTGTGATGGTGAGCCTGTTAAGAGGGAGGATGAAGAAAGGCTTGACGATGTTGGCTATGATGATGTTGGTGGAGTTAGGAAGCAAATGGCCCAGATCAGAGAACTGGTTGAACTCCCACTGCGTCACCCTCAGCTTTTCAAGTCTATTGGTGTGAAGCCTCCAAAGGGCATATTGCTGTTTGGACCACCTGGCTCTGGCAAGACCCTTATTGCTAGAGCTGTTGCCAATGAAACAGG
Reference sequence CCTTTTGTCATGGCCTAAGTTAGTTAACCTCCAGTGCTTAGCATGTCATCTGGGTTTTTCTAGTGTGCTGTTCACAACTTTGTTTATACAGCCTTTTAATGCCAACACCTTTGTTTATAAGTGTAAACAGATGGTGTTTCTCAGCTGTCATACTAAAACTGCTATTTCCCCCATGATATAGTATTTGTGTCTACCCTCTGAACTATCTTCATTGAAATAAAGAAATCCATTGTACCTATGCTACACTTTTTTGATGCTGCTGCTGATAAGAAATCTTGAAATGCCTTGCCATATTTTATTGGGACAATATACACTGCATGCAGTCCTTTTGTTGACATTGTATTCATCTGGTTTTTTCAGCTTACTTCCTAGAAGCTTACCGTCCTTTGAGGAAGGGAGATCTTTTCCTTGTGAGGGGTGGAATGAGAAGTGTGGAATTCAAAGTTATAGAGACAGACCCTGCAGAGTATTGCATCGTTGCACCAGACACCGAGATATTCTGTGATGGTGAGCCTGTTAAGAGGGAGGATGAAGAAAGGCTTGACGATGTTGGCTATGATGATGTTGGTGGAGTTAGGAAGCAAATGGCCCAGATCAGAGAACTGGTTGAACTCCCACTGCGTCACCCTCAGCTTTTCAAGTCTATTGGTGTGAAGCCTCCAAAGGGCATATTGCTGTTTGGACCACCTGGCTCTGGCAAGACCCTTATTGCTAGAGCTGTTGCCAATGAAACAGGTGCATTCTTCTTTCTGATTAAT
Type
EST
SNP
PCR primers
BE494848_cpR1 GCTCTCGCTTTCTCCTGCTA
BE494848D_F1 CCTTCTTGAAACGTGAGATTTCTTC
Sequence
NSFT03P2_Contig16841
Linkage Group
4D
Source Species
Triticum aestivum