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GrainGenes Probe Report: BE494474-3D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	BE494474-3D
Data at Wheat_SNP	BE494474-3D
Reference	Akhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks	SNP DEL;G>C;INS;A>T;T>G;G>C at 41-43;99;161, 1;353;562;619 SNP A>T;T>G;G>C at 353;562;619 SNP C>T;A>G;DEL;G>C;INS;A>T;T>G;G>C at 34;78;120-122;174;240, 1;428;637;694 Reference sequence TTCTTGGCTGGTCCTGTTCCCTTGACCCCGATCCCGTTTTTGCTGTTTCAGGCCAGGCAGCCGGAGATGCGCGCCGCAGCTATTCGCGATGGGAATGCTGATGTGATGTGAGATACTTCTTCGTTTTTGTCTTAATTCGATCCACTGTTTAGGTGCTCGATGCAGCATGCAGTGGTGGGTTTGCTTATCAGATCTTGAGCTGTAGGTTTGGGCATTAGTTTTGGTGCGAAATAGAAGGGGTTGACTGAGTGAAAGCTATTGATTTGTCGGAATGCGTTTGTTGTGGAATGGGTAGAGAGGTCTAGTTGGCTTGGAAGTATGGCCATTAATGTGGGAGAGCGTCATCTACCTTTCATTTCAAAAAATAAATAAATGTGGGATGCTGATTCATGTTATTTCGACTAGTTTGTTGAATGCATGAGTGCACAATGCAGTTCCTCTGAAGGGGCTCGGCTGCATCAGGTGCATCCCTAGTTCAACTGGAGATTAAGATTTTCGGTGCCAAACCTTACTAACCGGCCATGTTGCGCTGGACATCTTACTTATAGAGTTGTGAAAGTACTCCACTTTAGAATGTGTCTTGCAAGAGAATTTTGAAACCATCTAGGATTGGTGCTACTGGGGATGTCTTTAAGGTCACAATTTTCGGGTTTTAGCTGTAGTATAACTTGAATTATTAACAGTTTCTCATTTGCTGTCTAAAAAGGACCAACAAATTGGTCCAGTTCATTTCATATCTTTGTGCTATCTTCCGTATTGTAATTGTCCACGGAAGGAGTTATGGAAAGTCCTAAGTTGCCACTATGTTTCACTTCAATTTCAACATTTGCTCTCCCTGAGAAATGATTTTGCATGTTCAAATCTTAGTTATTCAGAATATCTACTCTTCTTGAACATTACAATTATGGAGGTTACTTTGCAGCCAGAAGCCTCTC Reference sequence GCAGCTATTCGCGATGGGAATGCTGATGTGATGTGAGATACTTCTTCGTTTTTGTCTTAATTCGATCCACTGTTTAGGTGCTCGATGCAGCATGCAGTGGTGGGTTTGCTTATCAGATCTTGAGCTGTAGGTTTGGGCATTAGTTTTGGTGCGAAATAGAAGGGGTTGACTGAGTGAAAGCTATTGATTTGTCGGAATGCGTTTGTTGTGGAATGGGTAGAGAGGTCTAGTTGGCTTGGAAGTATGGCCATTAATGTGGGAGAGCGTCATCTACCTTTCATTTCAAAAAATAAATAAATGTGGGATGCTGATTCATGTTATTTCGACTAGTTTGTTGAATGCATGAGTGCACAATGCAGTTCCTCTGAAGGGGCTCGGCTGCATCAGGTGCATCCCTAGTTCAACTGGAGATTAAGATTTTCGGTGCCAAACCTTACTAACCGGCCATGTTGCGCTGGACATCTTACTTATAGAGTTGTGAAAGTACTCCACTTTAGAATGTGTCTTGCAAGAGAATTTTGAAACCATCTAGGATTGGTGCTACTGGGGATGTCTTTAAGGTCACAATTTTCGGGTTTTAGCTGTAGTATAACTTGAATTATTAACAGTTTCTCATTTGCTGTCTAAAAAGGACCAACAAATTGGTCCAGTTCATTTCATATCTTTGTGCTATCTTCCGTATTGTAATTGTCCACGGAAGGAGTTATGGAAAGTCCTAAGTTGCCACTATGTTTCACTTCAATTTCAACATTTGCTCTCCCTGAGAAATGATTTTGCATGTTCAAATCTTAGTTATTCAGAATATCTACTCTTCTTGAACATTACAATTATGGAGGTTACTTTTGCAGCCAGAAGCCTCTCCACCCT
Type	EST SNP
PCR primers	BE494474_cpR1 CCGCAACAATGTCTCTGCTA BE494474D_F1 CGATCCCGTTTTTGCTGTTT
Sequence	NSFT03P2_Contig4483
Linkage Group	3D
Source Species	Triticum aestivum