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GrainGenes Probe Report: BE494189-6D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE494189-6D
Data at Wheat_SNP
BE494189-6D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP A>G;INS at 187;250, 3
SNP C>T;T>C;INS;T>G;A>G;C>A;A>G;G>A at 31;37;85, 1;93;134;281;291;332
SNP DEL;INS at 153-154;250, 3
Reference sequence TCATCGCCAGCGCAGGGAGTACCTGTACCTCGGTGGTCTGCTCTCCTCCGGCCTGTCGATCCTGCTCTGGCTGCAGTTTGCCACGTCCATCTTTGGCCACTCCTCTGGCAGCTTCATGTTTGAGGTGAGACACACACACACTGTGAAGATCCCACCACACAACAGAGATCATCCATACAATATTTGTGGCCGAATGAGCATGATACAAACATGGATTACGTGCCCTGCACGTTTACTTTGGCCTGTTGATCTTCCTGGGATACATGGTGTACGACACGCACGACATCATCAAGAGGGCGCACCACGGCGACGTGGATTACATCAAGCACGCGCTCACCCTC
Reference sequence ACAGGGTTTGTCGGAACCGCCATCGCCTTCGGGTGCTTCTCTGGCGCCGCCATCATCGCCAAGCGCAGGGAGTACCTGTACCTCGGTGGTCTGCTCTCCTCCGGCCTGTCGATCCTGCTCTGGCTGCAGTTTGCCACGTCCATCTTTGGCCACTCCTCTGGCAGCTTCATGTTTGAGGTGAGACACACACACACTGTGAAGATCCCACCACACAACAGAGATCATCCATACAATATTTGTGGCCGAATGATGATACAAACATGGATTACGTGCCCTGCAGGTTTACTTTGGCCTGTTGATCTTCCTGGGATACATGGTGTACGACACGCAGGAGATCATCGAGAGGGCGCACCACGGCGACATGGATTTCATCAAG
Type
EST
SNP
PCR primers
BE494189_cpF1_UCD ATCCTCGTGACAGGGTTTGT
BE494189D_R1_UCD AGCGCGTGCTTGATGAAA
Sequence
NSFT03P2_Contig16595
Linkage Group
6D
Source Species
Triticum aestivum