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GrainGenes Probe Report: BE490744-3B

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE490744-3B
Data at Wheat_SNP
BE490744-3B
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP INS at 33, 1
SNP C>T at 330
SNP G>A at 166
Reference sequence GATTTGATAGTATCACCCAAACTAACCACCTGGTTGATATATACGATTATCAAAAGTGATACGGCGCAAAACGAATCATAACCATATCAATAAGGAAGGAAATGAGATTACAACATAGGGCTAAGATCAGATCAGGCAACTTAATTTGCAGAAAGAATAACGTACATTGCAGAGCCAATTGTTTATAACTAGCTCTAATTACCCGATGCACAAGAACTTAGGGGGAAACTGACATATTATTTAATAGAATGGCAATAGCTAGGCCAGAAAAGATCACACAGCTGATTAGTTTGTACATCTTACAGATTATGCGAATAAAAGCAACATCTCTACAGATTAATTTTTAATCTTCCACCTGCCGGATTTCCCCATAAAAAAACTATTAATCTTCCATATCACAACTCCATTAAAAGATGAATGGCACTAAATTATAAAATCACCCTTTATACATATGTTCATGCAGACATCACT
Reference sequence TCCATGACCTGGCTTCTCTGTTTCACGTGAGTTATTTCTTGTGCCTGTTTTAGTGATGTCTGCATGAACATGTGGAAAGGGTGATTTTATAATTTTAGTGCCATTCATCTTTTAATGGAGTTGTGATATGGAAGATTAATAGTTTTTTTATGGGGAAATCCGGCAGGTGGAAGATTAAAAATTAATCTGTAGAGATGTTGCTTTTATTCGCATAATCTGTAAGATGTACAAACTAATCAGCTGTGTGATCTTTTCTGGCCTAGCTATTGCCATTCTATTAAATAATATGTCAGTTTCCCCCTAAGTTCTTGTGCATCGGGTAATTAGAGCTAGTTATAAACAACTGGCTCTGCAATGTACGTTATTCTTTCTGCAAATTAAGTTGCCCGATCTGATCTTAGCCCTATGTTGTAATCTCATTTCCTTCCTTATTGATATGGTTATGATTCGTTCTGCGCTGTATCACTTTTGATGGA
Type
EST
SNP
PCR primers
BE490744B_R1 TACGATCATCAAAAGTGATACAGC
BE490744_cpF1 GACCAGATGGGTTCCATGAC
Sequence
DSW03C5_Contig9873.1
Linkage Group
3B
Source Species
Triticum aestivum