Query (optional)   in Class  

GrainGenes Probe Report: BE446403-3D

[Submit comment/correction][What is a probe?]

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE446403-3D
Data at Wheat_SNP
BE446403-3D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP DEL;A>G;T>A;A>G;G>T;A>G;A>G;C>G;C>T;C>T;A>G;A>G at 9;120;175;180;192;221;226;289;314;317;319;369
SNP C>T at 314
Reference sequence TCTGGTTCTAATCCCTACCTCACACCGCCGGGACCGGTTCCATACCTCATCCGGTCTTCCATTGTATTGGGATTGGGATTGGGATTGGGGTTGTATCTATCTCAGTTCTCGGATCTGCAAACAGAAGGCAGGAAACAATTTATAACTTGCTACCAGATTGGGGAAAAAACCCCCTTTAGAAATTTATATTTGGGAATGGGGACGTGCAAATGCAAATGTGAATTTAATCTGTAAAAATAATTCTTTGGCCATAAAAAATCTTGAAAAGTTGGAGGGCGTGGGTAGGTACCTATGGTGTTGTGCTGGGGATGTTCCCCGAATTCGCTGTTATATTGATTCGCCTGCTGGCTTTGGCTGATTTCATCTATAAAAAAACATGTTGCTTGCTGCTGGTGCTATTGCCTGAC
Reference sequence GTTTCCTATCCCTACCTCACACCGCCGGGACCGGTTCCATACCTCATCCGGTCTTCCATTGTATTGGGATTGGGATTGGGATTGGGGTTGTATCTATCTCAGTTCTCGGATCTGCAGACAGAAGGCAGGAAACAATTTATAACTTGCTACCAGATTGGGGAAGAAACCGCCATTAGGAATTTATATTTTGGAATGGGGACGTGCAAATGCGAATGTGGATTTGATCTGTAAAAATAATTCTTTGGCCATAGAAGATCTTGGAGAGTTGGAGGGCGTGGGTAGGTAGCTATGGTGTTGTGCTGGGGATGTTTCCCGGATTCGCTGTTATATTGATTCGTCTGCTGGCTTTGGCTGATTTCATCTATGAGAAAACATGTTGCTTGCTGCTGGTGCTATTGTCTGACTGTTCATTTTTCCTTTCTGTGTTTGTAGCTTACTATAGTGATATATGTGTTGGAGCAATCGCTTGTCGCCTGGAGAAGAAGGAAGGAGGGGTCGTCCGTGTTTATAA
Type
EST
SNP
PCR primers
BE446403_cpR1 TATAAACACGGACGACCCCT
BE446403D_F4 TCTTGTTCTAATCCCTACCTCACA
Sequence
NSFT03P2_Contig8384
Linkage Group
3D
Source Species
Triticum aestivum