Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: BE444846-1D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	BE444846-1D
Data at Wheat_SNP	BE444846-1D
Reference	Akhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks	SNP INS;C>T;DEL;T>A at 9, 1;313;590-617;631 SNP C>T;DEL;T>A;T>C at 236;513;554;575 SNP C>T;DEL;DEL;T>A;T>C at 236;513;513;554;575 Reference sequence GCTGTATCAGGATTTATTATCCGATCCAGTTCATGGCTGTTGTTCTTCGCCACAGGAGTACCTAGTTGTTCTGTGCTCCTGATTTCAAGTCGCATGAGTCGTTATGCGGATGAAACACTTTATCCTGTTATGGTGTATTGGTTTTATCACTTTATCCTGTTATTAGTCTAGTTTTGCGAAGTACTACAGATGATGTCCAGATAATTTGATACCTACAAATCAAGTTGTTTTCCCCATCTTTTGATCACATACCATGTATGAACACCAGAGGAACTGACTTGTTAGGCACTAATTATAATTTGTTGTTGGCAGCTGTCTGCTTCATTTTTTCATCTGTAGAGTTGGATTGTAGGATCTTTAGTTGGTATGGGGCAAAATTGAGTTGATGTTAATTGAGGTTCTTTTATTTTGCTTGCATCTATCTGGGCAGATTGAAATGGGATTGGCTATAAGCCTATCACCCATCAATCAATTTATGTCCAATTTATCAACACAAAGCATATAGTTCTGTACGGGATATCAGGTAAAAAAACCAGTATCATAATAACATAGGCATTTCAATTCAGTTGTTGCTAGTTCTTGCAACTTATCTATTTGTTAGCGGGAGGCAAGCCTTAAGCAGTGTCAAACTGTTTCTTCATTTCTATATGTCCAACATCCAGTATCGTGGGCATCAATCAATTTATGTCCAATTTAGGAACACAATAGCATATAATTGTATACGGGATGTCCTGTAAAAACCAGTATCATAACATGGGCATTTGAATTCAGTTGTTGCTAGTTCTTGCAACTGATTTCTTGGTTAGCATGAGGCAAGTTCATTTTTATATGTCCACCATGCATTTATCTTAAATCATTTGATTGCTATTCAAGCAACTAATGTTTGCATGTGCTTGTGCCTTGCAGGTCGACGAGTCTGTCCAGGAGCTGGATCGTCGTGTCCCGCCGGTCGTGAAAGAGGTGCCGACCTATGCTCGCTCTGCAGCAGCTGAGGTGCAGAAGACAGGCATAATGGGCACAGCAACTGGC Reference sequence GGCCTGATTCAGTCGCATGAGTCGTTATGCGGATGAAACACTTTATCCTGTTATGGTGTATTGGTTTTATCACTTTATCCTGTTATTAGTCTAGTTTTGCGAAGTACTACAGATGATGTCCAGATAATTTGATACCTACAAATCAAGTTGTTTTCCCCATCTTTTGATCACATACCATGTATGAACACCAGAGGAACTGACTTGTTAGGCACTAATTATAATTTGTTGTTGGCAGCTGTCTGCTTCATTTTTTCATCTGTAGAGTTGGATTGTAGGATCTTTAGTTGGTATGGGGCAAAATTGAGTTGATGTTAATTGAGGTTCTTTTATTTTGCTTGCATCTATCTGGGCAGATTGAAATGGGATTGGCTATAAGCCTATCACCCATCAATCAATTTATGTCCAATTTATCAACACAAAGCATATAGTTCTGTACGGGATATCAGGTAAAAAAACCAGTATCATAATAACATAGGCATTTCAATTCAGTTGTTGCTAGTTCTTGCAACTTATCTATTTGTTAGCGGGAGGCAAGCCTTAAGCAGTGTCAAACTGTTTCTTCATTTCTATATGTTCAACATCCAGTATCGTGGGCATCAATCAATTTATGTCCAATTTAGGAACACAATAGCATATAATTGTATACGGGATGTCCTGTAAAAACCAGTATCATAACATGGGCATTTGAATTCAGTTGTTGCTAGTTCTTGCAACTGATTTCTTGGTTAGCATGAGGCAAGTTCATTTTTATATGTCCACCATGCATTTATCTTAAATCATTTGATTGCTATTCAAGCAACTAATGTTTGCATGTGCTTGTGCCTTGCAGGTCGACGAGTCTGTCCAGGAGCTGGATCGTCGTGTCCCGCCGGTCGTGAAAGAGGTGCCGACCTATGCTCGCTCTGCAGCAGCTGAGGTGCAGAAGACAGGCATAATGGGCACAGCAACTGGCCTGGCCAAGTCGGCCATGCTCGGNNG
Type	EST SNP
PCR primers	BE444846_cpR1 GGCTCGTAGCGGGTATACAA BE444846D_F1 TCTTCGCCACAGGAGTACCTA
Sequence	NSFT03P2_Contig18372
Linkage Group	1D
Source Species	Triticum aestivum