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GrainGenes Probe Report: BE443797-1D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	BE443797-1D
Data at Wheat_SNP	BE443797-1D
Reference	Akhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks	SNP INS at 415, 1 SNP A>T;G>A;A>T;C>T;INS at 16;171;940;984;1014, 2 Reference sequence ACGAAACATGAACCGAGCTGTCAACTTCATCGATGATTCCTTCTATGAGATGAACCTGCAATGGACAGGAAATATGTGAGTGTTTCAAATAGATATGCAATTCAGGGAACTCCACTGCTGCTTCAACTAGAGAGGAAGCACGATTTTGGCTCCCAAGAACATTCGGGGACGGCATTACTACTACTGGAACTGATGCACAAAATCTGGAAAGAAACTGAAACAGATCTTAAGTACTACCTCCGTCCGGGCTTATAAGTACCCTCTTTTGGGCTAAAGTTTGACCATAAATTTATAACTATAAAATGTAAACGACATGTCGTAAAAATTATATTATGGGAAATCTCTCTCAAATACAAATCCAACAATATATATTTTTTGTTTCATATAATTTATATTTTGTCAGGTTTACAGATGGCCAAAGTTTGACCCAAAATATGAGGGGGGCCCAATAAACCAGACAGAGGGAGTAGCACCCAGCATTCTGAAACAGATGGGAAGTAATGCCACGATGGACAGACAATACAAACAGTAGACGTAAAAAAAAAACAAGGTACGGGCATTTGTATATACCTCACACAACAACAGTTGGATTTGCAATCAAAACCCAACAGTTTTTAATAGCCCCTAAACAGTACGTCACAAGTGAACAGAAAGGAACTGAATATCAATACAGTAACACATCACGAATTATTAAAAATTGTTGTTCCATAACAACCCACTGTCTAAATATGTGTTGGGTTTTGATTCCCAAGCCATAACATAAAATACTGCAAGCATAAAACAAGAGGCATACAACAAAATACCATAGTTAAAAAAGGCGCGCCTAAGCGAGCGCTTAAGCGCGCCTACGCTCTAGGCGTTGGCAAAACGGATTGCGCATAACTATGCTTAATCTGTGCATAACTGCGCATAAGCATGCGCTTTGGTCAGTAAAGCGCAAGGCGGTGGCAAAACGCACAATTAACGCCTAAAGCTTTTTTGAACTATGCAAAATACACAAGCTTCTATGAACATAACGGAAATCTTATGGCGGAAGAATGTAGGAAATGGAGTTACCGAGAGGCTCTTCATAAGAAGACATTCCACTTTGCTGGTTGAAAGCTTAGTCTGCTTGGCAATAACACTTAATGGGATAGTTCTATCTTCTGATGGCCGGCTAAAGAATGCAACACAACAAAAAATATTAGGAAAAAACACGACAGGAAATGGAGGTGATATTGGAAAGTAATAGCCCAAAAATGGTACCTGAAGATTATCTCCATCAGACACAGAATATTGATCTTCTCAAGCAGTTTCTGTTCATTCTGCACCAATGCAGGCTGTGCACTAAGAGCAGCATTGTGAACCCCAC Reference sequence TTTTGCCCCGCCTTGCGCTTTACTGACCAAAGCGCATGCTTATGCGCAGTTATGCACAGATTAAGCATAGTTATGCGCAATCCGTTTTGCCAACGCCTAGAGCGTAGGCGCGCTTAAGCGCTCGCTTAGGCGCGCCTTTTTTAACTATGGTATTTTGTTGTATGCCTCTTGTTTTATGCTTGCAGTATTTTATGTTATGGCTTGGGAATCAAAACCCAACACATATTTAGACAGTGGGTTGTTATGGAACAACAATTTTTAATAATTCGTGATGTGTTACTGTATTGATATTCAGTTCCTTTCTGTTCACTTGTGACGTACTGTTTAGGGGCTATTAAAAACTGTTGGGTTTTGATTGCAAATCCAACTGTTGTTGTGTGAGGTATATACAAATGCCCGTACCTTGTTTTTTTTTACGTCTACTGTTTGTATTGTCTGTCCATCGTGGCATTACTTCCCATCTGTTTCAGAATGCTGGGTGCTACTCCCTCTGTCTGGTTTATTGGGCCCCCCTCATATTTTGGGTCAAACTTTGGCCATCTGTAAACCTGACAAAATATAAATTATATGAAACAAAAAATATATATTGTTGGATTTGTATTTGAGAGAGATTTCCCATAATATAATTTTTACGACATGTCGTTTACATTTTATAGTTATAAATTTATGGTCAAACTTTAGCCCAAAAGAGGGTACTTATAAGCCCGGACGGAGGTAGTACTTAAGATCTGTTTCAGTTTCTTTCCAGATTTTGTGCATCAGTTCCAGTAGTAGTAATGCCGTCCCCGAATGTTCTTGGGAGCCAAAATCGTGCTTCCTCTCTAGTTGAAGCAGCAGTGGAGTTCCCTGAATTGCATATCTATTTGAAACACTCACATATTTCCTGTCCATTGCAGGTTCATCTCATAGAAGGAATCATCGATGAAGTTGACAGCACGGTTCATGTTTCGTGGGTCCAGCCTAGAGTACTTGGCATCCCACAGGTGAAGGCGTTGCGGAG
Type	EST SNP
PCR primers	BE443797_cpR1 CCTCGATGGACAACAGTGTG BE443797D_F2 ATAGAAGCTTGTGTATTTTGCAT
Sequence	NSFT03P2_Contig18059
Linkage Group	1D
Source Species	Triticum aestivum