Query (optional)   in Class  

GrainGenes Probe Report: BE443745-5D

[Submit comment/correction][What is a probe?]

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE443745-5D
Data at Wheat_SNP
BE443745-5D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP T>G;INS at 82;82, 1
SNP INS;T>A;T>C at 189, 1;190;393
Reference sequence TTTGAGAAGCTGCTCTTTGACAACATTACTATAGTTGATTCGCATCGAGGACTTGGAATGCAGATCCGTGATGGAGGTATTTTTTTTTGCTTCCAATTGTCAATGAACTATCATACTATCAGGCGGCATAACTGAATATCTTATTAAAAAAACTGATATGTTGATTGCCACTTTGAGGCATTGGGGGTGGGAGGGGGGGTGGGGGGCACTGCCCCGGCTCCCCTCCTAGGCCAAGCAAAGATAATAATTAACAGGTAGTGCTTGGGCTTAAATTTGTCTCTGGATAAAGTGTTGAATTGGTTTGGCACCTTGAAATTTTACTTAGCAGTGATCCTATGTTGTACTTTGAGCTATTGCTTTAATTAGTGTGCCATTTAAGCATCCTGATTTGGAGATACATAATTTTGCAGGGAACGTTAGTGATGTGACATTCTCAAACATCAAAATGCGCACTAGGTACTACCATCCTTCATGGTGGGGGAGAG
Reference sequence ATCTGCCCGAAGTCTAGCACAGGGCCTGTTTACAACTTGACAGCAACAAATTGCTGGATCCGTACTAAATCGTGCGCTATCAAATTTGGAAGCGCAAGCTTTTTCAACTTTGAGAAGCTGCTCTTTGACAACATTACTATAGTTGATTCGCATCGAGGACTTGGAATGCAGATCCGTGATGGAGGTATTTTTTTTTGCTTCCAATTGTCAATGAACTATCATACTATCAGGCGGCATAACTGAATATCTTATTAAAAAAACTGATATGTTGATTGCCACTTTGAGGCATTGGGGGTGGGAGGGGGGGTGGGGGGCACTGCCCCGGCTCCCCTCCTAGGCCAAGCAAAGATAATAATTAACAGGTAGTGCTTGGGCTTAAATTTGTCTCTGGATAAAGTGTTGAATTGGTTTGGCACCTTGAAATTTTACTTAGCAGTGATCCTATGTTGTACTTTGAGCTATTGCTTTAATTAGTGTGCCATTTAAGCATCCTGATTTGGAGATACATAATTTTGCAGGGAACGTTAGTGATGTGACATTCTCAAACATCAAAATGCGCACTAGGTACTACCATCCTTCATGGTGGGGGAGAGCGAA
Type
EST
SNP
PCR primers
BE443745_cpR1 GAAATGGTGCCTTCTTTGGA
BE443745D_F1 GTGCGCTATCAAATTTGGATGC
Sequence
NSFT03P2_Contig13212
Linkage Group
5D
Source Species
Triticum aestivum