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GrainGenes Probe Report: BE442961-4A

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE442961-4A
Data at Wheat_SNP
BE442961-4A
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP INS;G>T at 325, 1;583
SNP DEL at 233-234
SNP G>T at 583
Reference sequence ACTATCCGCACCAATGTTGTAGGCACCTTGAATCTTGCTGATGTTTGTCGTGAGCAGGGGTTGCTCATGATTAATTATGCTACAGGTTGCATATTTGAGTATAATGCTGAACACCCTGAAGGGTCTGGAATTGGTTTTAAAGAGGAGGACACACCCAACTTTGTAGGTTCATTTTATTCCAAAACCAAAGCCATGGTAAGTTCAAATATTTTGTTTATGATGTGTAACACATATCCATTTGCTTCTCGTGGAAACAAACTCATTTGTTCATACATACAATGCAGGTGGAAGAGTTATTGAAGGACTATGATAATGTCTGTACTCTTAGAGTCAGGATGCCCATATCATCAGACCTGAGCAATCCTCGTAACTTCATCACAAAAATAGCCCGCTATGACAAGGTGGTGAACATTCCCAACAGTATGACAATTTTGGATGAATTGTTGCCTATCTCTGTTGAGATGGCGAAGCGGGATTGTAGGGGCATATGGAATTTCACCAACCCGGGGGTTGTCAGTCACAACGAGATTCTGGAGATGTACAAGGAATACATCAACCCAGACTTCAAGTGGACCAACTTCACGCTCGAAGAGCAGGCCAAGGTTATAGTTGCACCCAGAAGCAACAACGAAATGGACGCGTCAAAGCTGAAGTCCG
Reference sequence CTATCCGCACCAATGTTGTAGGCACCTTGAATCTTGCTGATGTTTGTCGTGAGCAGGGGTTGCTCATGATTAATTATGCTACAGGTTGCATATTTGAGTATAATGCTGAACACCCTGAAGGGTCTGGAATTGGTTTTAAAGAGGAGGACACACCCAACTTTGTAGGTTCATTTTATTCCAAAACCAAAGCCATGGTAAGTTCAAATATTTTGTTTATGATGTGTAACACATATCCTTTTGCTTCTCGTGGAAACAAACTCATTTGTTCATACATACAATGCAGGTGGAAGAGTTATTGAAGGACTATGATAATGTCTGTACTCTTAGAGTCAGGATGCCCATATCATCAGACCTGAGCAATCCTCGTAACTTCATCACAAAAATAGCCCGCTATGACAAGGTGGTGAACATTCCCAACAGTATGACAATTTTGGATGAATTGTTGCCTATCTCTGTTGAGATGGCGAAGCGGGATTGTAGGGGCATATGGAATTTCACCAACCCGGGGGTTGTCAGTCACAACGAGATTCTGGAGATGTACAAGGAATACATCAACCCAGACTTCAAGTGGACCAACTTCACGCTCGAAGAGCAGGCCAAGGTTATAGTTGCACCCAGAAGCA
Type
EST
SNP
PCR primers
BE442961A_R1 TCCATTTCGTTGTTGCTTCTG
BE442961_cpF1 AACAGGACACTATCCGCACC
Sequence
NSFT03P2_Contig14988
Linkage Group
4A
Source Species
Triticum aestivum