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GrainGenes Probe Report: BE442918-5D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE442918-5D
Data at Wheat_SNP
BE442918-5D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP T>C;DEL;T>C;A>T;G>A;DEL;A>G;INS;T>A;T>A at 194;212;218;235;254;387;433;480, 2;486;491
SNP INS at 212
SNP DEL at 212
Reference sequence GAACTAGGGACATGGAGGCATGCCATAAATGTGAACTTTGTCGCTGTTATTGATGGTACTCGCATTGCAGTAAGTGTTGACTATTGCAATAACATTGTTAAATTTATTTGTTCAGTAACTCAATCTGCTAATCTTGTAGTAACACTGAGTGCTGTCTATGGAAATTGTGTTTGGCTCCTGAGCTCCATGGAGCTTGGCTTTGAAAAAAAAAACTGATTTCTAGATTTTAAAAAAATCTGAGAAAAATACACACGTACCTATGGATGTATACTACTTTTCTGTAAAATTTCATGGTGAAATACATTTTCATGCGAGCTACAAAAAAGTAACAAAATCATGTGTTTGTAGCATATGTACCATTCACTATAAAAGTACATGATTTTTTTTACACAGCTCACTTAAAAACGCATTTCATAATAAAATTTTATACACATGCAGTATACATCTCCAAGTACCTGTGTATTTATTTTCAGTTTTTTTAACTTTAAAATGTCAGCTTTTGAATTTTAGAAAAGTCCGGGCTCCATGGAGCCCGGAAGCCAAATATCCTATCTCGTGCTGTCTAAGCTTTCTTATTACTTAGACATACTAAATAATATAACCCAGAAGTTCTGCATAGGCTTTAATTGTCTGTTGATTCAGTTGTTTAAGGGAAGAAAGTATTGGGTTTCCCTTTATTTGTTTCCATTAACCATTACTCAAGGAAATTAAGTG
Type
EST
SNP
PCR primers
BE442918_cpF1 GGAACTAGGACATGGAGGCA
BE442918D_R1 GCTCCAAAGGAAACCATAGGG
Sequence
NSFT03P2_Contig16640
Linkage Group
5D
Source Species
Triticum aestivum