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GrainGenes Probe Report: BE438268-4D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE438268-4D
Data at Wheat_SNP
BE438268-4D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP A>C;T>C;A>G at 106;621;625
SNP A>C;T>C;T>C at 106;598;621
SNP C>A;A>C;T>C;A>G at 5;276;791;795
Reference sequence GAGGCTCCCCTTGACAAAGTCTGTGTTCTTAGCTGTGGTATTTCCACTGGTAAGTTGATAAGTTGACTTCTGTTGCTGTGGTATGCTTGTTATGGCTACATCTTATCTTGAGATGCTGAGTTGCCATTCCTTTTGTAGGTCTTGGCGCATCCATTAATGTTGCAAAACCACCAAAGGGTTCGACAGTGGCGATATTTGGGCTAGGAGCTGTTGGCCTTGCTGTAAGTGCCCTAATTCCTCTCTTGATTGTTCTGCAATTGCAATCGGCATGTGCGACTGGCTTGCATCTATTTACCCCTTCGTGTTTGTATGATTCAGGCTGCAGAAGGTGCAAGGATTGCAGGTGCATCAAGGATCATTGGTGTTGACTTGAACGCCAGCAGATTTGAAGAAGGTAAATACTTCTGTTTTTACTATTCATGAGTCTAATCTGTTGCTTTGCGAAGATTCTAATGTTTTATATCTTGTCCATGTTCAGCTAGAAAATTTGGCTGCACGGAATTTGTGAACCCGAAAGATCACACCAAGCCAGTTCAACAGGTTTGTTTCTTCATGTAAGGCAATATGGTTATTCATTGTGCTTAGTGATCATAACATACAACTTATTGATGATGCTTTAGGTGCTCGCTGAGATGACAAATGGTGGAGTTGACCGCAGTGTTGAGTGCACGGGCAACGTCAATGCTATGATACAAGCATTTGAATGTGTTCATGATGTATGACTTTCTAAGACATTAATCATCCACTCAAGCATGATAATTTTGCATTGCCTCTTTTCTCTAGATGAAAATTTGAATTCTGTGATCTATATATGCAGGGCTGGGGTGTAGCTGTGCTGGTGGGTGTG
Reference sequence CCAAAGGGTTCGACAGTGGCGATATTTGGGCTAGGAGCTGTTGGCCTTGCTGTAAGTGCCCTAATTCCTCTCTTGATTGTTCTGCAATTGCAATCGGCATGTGCGACTGGCTTGCATCTATTTACCCCTTCGTGTTTGTATGATTCAGGCTGCAGAAGGTGCAAGGATTGCAGGTGCATCAAGGATCATTGGTGTTGACTTGAACGCCAGCAGATTTGAAGAAGGTAAATACTTCTGTTTTTACTATTCATGAGTCTAATCTGTTGCTTTGCGAAGATTCTAATGTTTTATATCTTGTCCATGTTCAGCTAGAAAATTTGGCTGCACGGAATTTGTGAACCCGAAAGATCACACCAAGCCAGTTCAACAGGTTTGTTTCTTCATGTAAGGCAATATGGTTATTCATTGTGCTTAGTGATCATAACATACAACTTATTGATGATGCTTTAGGTGCTCGCTGAGATGACAAATGGTGGAGTTGACCGCAGTGTTGAGTGCACGGGCAACGTCAATGCTATGATACAAGCATTTGAATGTGTTCATGATGTATGACTTTCTAAGACATTAATCATCCACTCAAGCATGATAATTTTGCATTGCCTCTTTTCTCTAGATGAAAATTTGAATTCTGTGATCTATATATGCAGGGCTGGGG
Type
EST
SNP
PCR primers
BE438268_cpR1 CTTGAATTCGGCATCCTTGT
BE438268D_F1 AGATGCTGAGTTGCCATACC
Sequence
NSFT03P2_Contig18568
Linkage Group
4D
Source Species
Triticum aestivum