Query (optional)   in Class  

GrainGenes Probe Report: BE425301-4D

[Submit comment/correction][What is a probe?]

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE425301-4D
Data at Wheat_SNP
BE425301-4D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP C>T;A>G;G>C at 137;316;330
SNP T>C;G>A;C>T;A>C;A>G;G>C;T>A at 43;121;131;238;310;324;432
SNP T>C;C>T;A>C;A>G;G>C at 49;137;244;316;330
Reference sequence GCACAGGGTGTTCGAAGTATCTCTAGCTGATCTTCAGAACGATGAGGACCAGGCCTACAGGAAGATCAGACTCCGTGCTGAGGATGTGCAAGGGATGAATGTCCTCACAAACTTCTGGGTGATGATCTCTCTCGCATTGCCTGAAACCTAATGTTGTGTTGTGTTTTTGCTTTGCTAACCTGTTCTTCCTCTTGCCAGGGCATGGACTTCACCACTGACAAGCTCAGGTCTCTTGTGAGGAAGTGGCAGACACTCATTGAGGCTCATGTGGATGTGAAGACCACTGACAACTACATGCTCCGCATGTTCACCATTGGCTTCACGAAGAGACGCCCAAACCAGGTGAAGCGCACTTGCTATGCCCAAGCAAGTCAGATCAGACAGGTAAATTAGTCCACCTTCCTCCTTTTGTATCTTTGTATTGATAATGTTTTGGTGATCATTGAGCTGATTGTTAACAACTCTATCTGTGTTTCTTGCTTGTAGATCCGCCGCAAGATGGTTGAGATCATGGTCAACCAAGCTGCAAGCTGTGACTTGAAGGAGCTTGTGAACAAGTTCATCCCTGA
Reference sequence TCTGAAGCACAGGGTGTTCGAAGTATCTCTAGCTGATCTTCAGAACGATGAGGACCAGGCCTACAGGAAGATCAGACTCCGTGCTGAGGATGTGCAAGGGATGAATGTCCTCACAAACTTCTGGGTAATGATCTCTCTCGCATTGCCTGAAACCTAATGTTGTGTTGTGTTTTTGCTTTGCTAACCTGTTCTTCCTCTTGCCAGGGCATGGACTTCACCACTGACAAGCTCAGGTCTCTTGTGAGGAAGTGGCAGACACTCATTGAGGCTCATGTGGATGTGAAGACCACTGACAACTACATGCTCCGCATGTTCACCATTGGCTTCACGAAGAGACGCCCAAACCAGGTGAAGCGCACTTGCTATGCCCAAGCAAGTCAGATCAGACAGGTAAATTAGTCCACCTTCCTCCTTTTGTATCTTTGTATTGATAATGTTTTG
Type
EST
SNP
PCR primers
BE425301_cpF1 CCTCAGAGGGTCTGAAGCAC
BE425301D_R1 TCAATGATCACCAAAACATTATCA
Sequence
NSFT03P2_Contig18766
Linkage Group
4D
Source Species
Triticum aestivum