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GrainGenes Probe Report: BE422939-6D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE422939-6D
Data at Wheat_SNP
BE422939-6D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP T>C;G>A;G>A;A>T;A>C;T>A;C>A;G>A;INS;A>T;G>A;G>A;DEL;C>G;C>G;C>G;G>A;C>T;DEL;G>T;T>A;INS;INS;INS;T>C at 45;80;144;184;185;215;226;227;234, 2;240;329;339;350;377;385;399;400;409;412-424;435;453;553, 2;554, 1;556, 23;750
SNP G>A;G>A;A>T;A>C;T>A;C>A;G>A;INS;A>T;G>A;G>A;DEL;C>G;C>G;C>G;G>A;C>T;DEL;G>T;T>A;A>T;INS;INS;INS;A>G;INS at 80;144;184;185;215;226;227;234, 2;240;329;339;350;377;385;399;400;409;412-424;435;453;500;553, 2;554, 1;556, 23;607;638, 1
SNP A>G at 254
Reference sequence TCTGAACACCAATGGCATGAGAAACAGACTATTGCATTCAGGTATCATTTAGGAAGAACACGAATGTGTATACTGCAGAGATTGTTATTTCCCAAACATTATACCCTGTTTCCAATTGAAGAAACATGTTTATATAAGCCATGGAGACATGGAACCACAGAAAGCATGGACAAATTTTATACTAACATTGGTAGTGGCGTTGAAGTCACAAGTTTGTTTCATGTACGAACAGAGGAGATATCAGAAATGGTTCAATTGGTGTTGGTTCTGAATTGACATTTGTACTATGAACTGAACTTGTTCTACTCATTAGTACCAAAAGTAATGCGGTCTAAACTGAGAGTATCACAAAACTGTCTGGCTACTGATTACCCTACAAGTCATCACACTACCATGTCCGGATGGATACGCTAATTAGTACCGCATATTCATAGGTAATAATAGATGGCGTGTTGAATTTTCCTGTAAACTGGTATTTAATCAGTACAGATTTCCCATTAGAGCTATGACAAGTTAGTAAGTTAGCGAACTGCCATTATGGATAGCGAAATTTGATTAAACTGAATTCACATATAACCAGGACTACATAAGTCTAGATGAACAGCTAGCTAATCTTGCACATTCGAGACAAAATTTGATTAAGACCCAAAAGTACATTAGCAAGTAGCAGCAGTAGGAACAGTAAATGGTTATGTGCCTGAATAAGGAAGAAAATGAGACTTACCCATGAAAATTGTCCACCATGGAATTTGTTGTCATTCCC
Type
EST
SNP
PCR primers
BE422939_cpR1_UCD GATTCAATCTTGGCTGGGAA
BE422939D_F2_UCD GCCATTTGCATACAAATGAAGAAAG
Linkage Group
6D
Source Species
Triticum aestivum