Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: BE406996-5D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	BE406996-5D
Data at Wheat_SNP	BE406996-5D
Reference	Akhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks	SNP INS;DEL at 307, 36;308-310 SNP INS at 280, 1 Reference sequence AAACTTTACAGCCTGAAGAATCTTATCTTATTGTTCTAAAAAAAAGAATCTTATCTTATTGCACATGGTACATCTTGGGGATATCAATAATACTGTGTCCCGGCAACTAGAATACTTTGCATGCTTTACATATGGTGATTTTGAGAACTTGATTTTGCACCATTAATAACTAATAAGTCTACATTATCATATACTTTTCTCACCTTACAATGGTATATCATTCTTTTGAATTTTGTCTATGTCTACCTGTGAAGTCAGTTCCTACAGTAATGTTTTTTTTACCGAATTCCCTCAGTAATGTTTGCTAACTGTCACTAGGATGAGTTGCGCAATGCTGTATTGCTTGTTTTTGCTAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAAATAACAGATAAGCTTGGTCTACA Reference sequence GCTGAATGAGGCAAGTGCTATATATACCTGTTGAAATGTTGGACTGTGTTATCTTCTGTAGATGCACGGTCTAATTTTTGGAAACTCATGTATTATAGAAGTATTAAACATTACATTCAGAGTACATGTGTAAAACTTTACAGCCTGAAGAATCTTATCTTATTGTTCTAAAAAAAAGAATCTTATCTTATTGCACATGGTACATCTTGGGGATATCAATAATACTGTGTCCCGGCAACTAGAATACTTTGCATGCTTTACATATGGTGATTTTGAGAACTTGATTTTGCACCATTAATAACTAATACTGGGTATATCATTCTTTTGAATTTTGTCTATGTCTACCTGTGAAGTCAGTTCCTACAGTAATGTTTTTTTTACCGAATTCCCTCAGTAATGTTTGCTAACTGTCACTAGGATGAGTTGCGCAATGCTGTATTGCTTGTTTTTGCTAACAAGCAAGATCTTCCCAATGCCATGA
Type	EST SNP
PCR primers	BE406996_cpR1 CGCTGACGCAGAGAGTGTAG BE406996D_F1 GTACATGTGTAAAACTTTACAGCC
Sequence	NSFT03P2_Contig17206
Linkage Group	5D
Source Species	Triticum aestivum