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GrainGenes Probe Report: BE398591-7D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE398591-7D
Data at Wheat_SNP
BE398591-7D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP T>G;T>C;DEL at 138;674;802
SNP T>C at 4
SNP T>G;T>C at 7;542
Reference sequence GAACATTGTCAACATTGATTATCTACAATATACCAACGAGTCCAGATCACTACCAAAAACAACTCACAGTGCGTGATATCATGTTGAAGGAAATGGATATACAATATATGATATGTTTGGTTGGTTCACAGGATTATTAAAACGTAGGAATAGAAGAAGAACAATGGCAAAAAATAGGATAGGAATGCAAGTGCAAAACAACTTTTCACACTAATATAAGTCTTGTTCTAAGGAATAGAACATAGGACAACAACAGCAAAGCCTTTCAGTCCCAAACGAGTCGGGGTAGGCTAGAGTTGAAATCCATAAGATATCGAAACCAAGTCATGGTTCTGGCAGTGGACAACTAACTTACTCGCACCCCTGTCCATGGCTAAATCTTTGGTGATATTCCAGTTCTTAAGATCACTCTTTAGAGACTCCTCTCATGTCAAGTTTGGTCTACCCCAACCTCCCTTGACATTATCAGGACGTCTTAACCATCCGCTAAAGACAGTCAAATCAAACTCAAAGCACATGAAGAACGATAACTAGGATGGAAGTCAAGTAGATTATAAAATTCCTGCTATTTTCTTTTCAAAATGTGATCAAAGGAACATTCCTCCACTTTTCCTTTGAACAAAACGATTGAACAGTGTTGCTAAAAGAAAATTTCCTATTCTTACATTTTTTTTTCACTTTTCCTATGAACTAGGCAAGGCCTAAAGCTTGTTATATAATGGTTACATTTTGGACATTACCATGAGAAAAGTTATGTTCGAGTTACATATTCAGTATGACAGTGTTGCAGTGGAAAAAAAAAGAGAAACCAATAGATGCTTAACCATCAGTATATTAATATGGCATACCATCACGTTATCTCCAATACGAGCATTCTTGTCAATTATTGCTCTTTGAT
Reference sequence GATTATTAAAACGTAGGAATAGAAGAAGAACAATGGCAAAAAATAGGATAGGAATGCAAGTGCAAAACAACTTTTCACCTAATATAAGTCTTGTTCTAAGGAATAGAACATAGGACAACAACAGCAAAGCCTTTCAGTCCCAAACGAGTCGGGGTAGGCTAGAGTTGAAATCCATAAGATATCGAAACCAAGTCATGGTTCTGGCAGTGGACAACTAACTTACTCGCACCCCTGTCCATGGCTAAATCTTTGGTGATATTCCAGTTCTTAAGATCACTCTTTAGAGACTCCTCTCATGTCAAGTTTGGTCTACCCCAACCTCCCTTGACATTATCAGGACGTCTTAACCATCCGCTAAAGACAGTCAAATCAAACTCAAAGCACATGAAGAACGATAACTAGGATGGAAGTCAAGTAGATTATAAAATTCCTGCTATTTTCTTTTCAAAATGTGATCAAAGGAACATTCCTCCACTTTTCCTTTGAACAAAACGATTGAACAGTGTTGCTAAAAGAAAATTTCCTATTCTTACATTTTTTTTTCACTTTTCCTATGAACTAGGCAAGGCCTAAAGCTTGTTATATAATGGTTACATTTTGGACATTACCATGAGAAAAGTTATGTTCGAGTTACATATTCAGTATGACAGTGTTGCAGTGGAAAAAAAAAGAGAAACCAATAGATGCTTAACCATCAGTATATTAATATGGCATACCATCACGTTATCTCCAATACGAGCATTCTTGTCAATTATTGCTCTTTTGA
Type
EST
SNP
PCR primers
BE398591_cpR1 CTCCTTGCTGAAAAAGGTGG
BE398591D_F1 ACAGTGCGTGATATCATGTTG
Sequence
NSFT03P2_Contig12674
Linkage Group
7D
Source Species
Triticum aestivum