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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0398120

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0398120
Locus	HORVU.MOREX.r2.5HG0398120.1
URL	Gene Ontology GO:0003714 Gene Ontology GO:0006351 Gene Ontology GO:1903507
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: PKHD-type hydroxylase PST_0995 GO:0003714; molecular_function; transcription corepressor activity GO:0006351; biological_process; transcription, DNA-templated GO:1903507; biological_process; negative regulation of nucleic acid-templated transcription
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0398120.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)