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GrainGenes Probe Report: WMC434

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
WMC434  [ Marker Report ]
Locus
Xwmc434-4D
[ Show all 9 ]
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 24c4
Donor: ITCF
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 165 bases located on 5D, 175 bases located on 2B
Trimmed to Ssp1 at 5' end and to insert at 3' end. Bases 79 to 107 show homology to 2e8 bases 345 to 373 (29 in longest run, maxScore = 53). (GT)12 330 to 353.
Type
PCR
SSR
PCR primers
Forward ggAgccTgATTAggcTggAc at 195 length 20 bases, Tm 63
Reverse AgccAAAcAgccAAcAgAgT at 356 length 20 bases, Tm 62
SSR size
181 bases expected, Chinese Spring
Amplification Conditions
61C anneal, stuttery smear.
Sequence
WMC434
Source Species
Triticum aestivum