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GrainGenes Probe Report: WMC397

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
WMC397  [ Marker Report ]
Locus
Xwmc397-6B
Xwmc0397.1-6B
Xwmc397b
wmc397
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 10h12
Donor: Jacquemin, Gembloux
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 162 bases located on 3A, 364 bases located on 4B
5' end not located, trimmed to Rsa1 at 3' end. (CA)9 69 to 86, (GA)14 93 to 120.
Type
PCR
SSR
PCR primers
Forward AgTcgTgcAccTccATTTTg at 46 length 20 bases, Tm 63
Reverse cATTggAcATcggAgAccTg at 186 length 20 bases, Tm 63
SSR size
160 bases expected, Chinese Spring
Amplification Conditions
61C anneal, polymorphic on acrylamide.
Sequence
WMC397
Source Species
Triticum aestivum