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GrainGenes Probe Report: WMC376

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
WMC376  [ Marker Report ]
Locus
Xwmc376-5B
Xwmc376
wmc376
wmc376-5B
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 12a12.2
Donor: Mohler, Munich
Multiple inserts in this clone. This is the second insert. Trimmed to Rsa1 at 5' end and to insert at 3' end. Bases 65 to 115 (complement) show homology to 11b2 bases 64 to 114 (51 in longest run, maxScore = 69). (GT)16 115 to 146, (GT)17 201 to 234.
Type
PCR
SSR
PCR primers
Forward TcTcAAccAccgAcTTgTAA at 33 length 20 bases, Tm 59
Reverse AcATgTAATTggggAcAcTg at 235 length 20 bases, Tm 58
SSR size
222 bases expected, Chinese Spring
Amplification Conditions
51C anneal, polymorphic on acrylamide.
Sequence
WMC376
Source Species
Triticum aestivum