GrainGenes Probe Report: TraesCS7B01G492100
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
TraesCS7B01G492100
Locus
TraesCS7B01G492100.1
URL
Pfam PF02375
[ Show all 22 ]
Reference
IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|A0A199VDI0|A0A199VDI0_ANACO Human Readable Description: Lysine-specific demethylase Pfam IDs Description: PF02375: jmjN domain; PF01388: ARID/BRIGHT DNA binding domain; PF00628: PHD-finger; PF02373: JmjC domain, hydroxylase; PF02928: C5HC2 zinc finger; PF08429: PLU-1-like protein InterPro IDs Description: IPR001606: ARID DNA-binding domain; IPR001965: Zinc finger, PHD-type; IPR003347: JmjC domain; IPR003349: JmjN domain; IPR004198: Zinc finger, C5HC2-type; IPR011011: Zinc finger, FYVE/PHD-type; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR013637: Lysine-specific demethylase-like domain; IPR019786: Zinc finger, PHD-type, conserved site; IPR019787: Zinc finger, PHD-finger GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0005515 MF: protein binding; GO:0008270 MF: zinc ion binding; GO:0016706 MF: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; GO:0055114 BP: oxidation-reduction process
Type
Genomic
Sequence
TraesCS7B01G492100.1 TraesCS7B01G492100.2
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
GrainGenes Probe Report: TraesCS7B01G492100
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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